RNA–Protein interactions for RNA: ENST00000515063.1

CAST-242, Transcript of calpastatin, humanhuman

TSL 1 (best)

Gene CAST, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-242ENST00000515063 TBC1D8O95759 1140 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 MPOP05164 745 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 SSBP05455 408 aaKnown RBP eCLIP5.44□□□□□ -1.54
CAST-242ENST00000515063 ATF4P18848 351 aaPredicted RBP5.44□□□□□ -1.54
CAST-242ENST00000515063 ZNF143P52747 638 aaPredicted RBP5.44□□□□□ -1.54
CAST-242ENST00000515063 NCAPHQ15003 741 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 TNNI3KQ59H18 835 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 NPM2Q86SE8 214 aaKnown RBP5.44□□□□□ -1.54
CAST-242ENST00000515063 SLCO6A1Q86UG4 719 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 ANAPC16Q96DE5 110 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 ZDHHC15Q96MV8 337 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 KLHL25Q9H0H3 589 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 CLSPNQ9HAW4 1339 aa5.44□□□□□ -1.54
CAST-242ENST00000515063 CD3EP07766 207 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 C1QTNF9P0C862 333 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 CYP4F8P98187 520 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 GRB10Q13322 594 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 RTP2Q5QGT7 225 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 EEF1DP3Q658K8 133 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 POMZP3Q6PJE2 187 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 VHLLQ6RSH7 139 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 ATG14Q6ZNE5 492 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 SIRT2Q8IXJ6 389 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 NUP43Q8NFH3 380 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 MCOLN1Q9GZU1 580 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 SUGT1Q9Y2Z0 365 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 CC2D2AQ9P2K1 1620 aa5.43□□□□□ -1.54
CAST-242ENST00000515063 TRBV23OR9-2A0A075B6M9 112 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 A0A1W2PQJ5 194 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 ANKRD34BA5PLL1 514 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 ETV2O00321 342 aaPredicted RBP5.42□□□□□ -1.54
CAST-242ENST00000515063 FGF10O15520 208 aaPredicted RBP5.42□□□□□ -1.54
CAST-242ENST00000515063 EPHX1P07099 455 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 PRKCAP17252 672 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 RANGAP1P46060 587 aaPredicted RBP5.42□□□□□ -1.54
CAST-242ENST00000515063 CORO7P57737 925 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 ERVFRD-1P60508 538 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 PPP2R5DQ14738 602 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 KCNA10Q16322 511 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 CIAPIN1Q6FI81 312 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 RCSD1Q6JBY9 416 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 KIAA1211LQ6NV74 962 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 RCC1LQ96I51 464 aaKnown RBP5.42□□□□□ -1.54
CAST-242ENST00000515063 CD320Q9NPF0 282 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 SIRT5Q9NXA8 310 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 ACSL6Q9UKU0 697 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 PCDHB10Q9UN67 800 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 ARAP1Q96P48 1450 aa5.42□□□□□ -1.54
CAST-242ENST00000515063 RFXAPO00287 272 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 SEPHS1P49903 392 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 DLG4P78352 724 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 AMPD2Q01433 879 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 NR1I3Q14994 352 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 LRRC56Q8IYG6 542 aaPredicted RBP5.41□□□□□ -1.54
CAST-242ENST00000515063 ADCY4Q8NFM4 1077 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 KLHL6Q8WZ60 621 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 PTCHD1Q96NR3 888 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 FCRL3Q96P31 734 aaPredicted RBP5.41□□□□□ -1.54
CAST-242ENST00000515063 APBA2Q99767 749 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 PLCD4Q9BRC7 762 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 BUD13Q9BRD0 619 aaKnown RBP eCLIP5.41□□□□□ -1.54
CAST-242ENST00000515063 IMPACTQ9P2X3 320 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 CGGBP1Q9UFW8 167 aaPredicted RBP5.41□□□□□ -1.54
CAST-242ENST00000515063 DNMBPQ6XZF7 1577 aa5.41□□□□□ -1.54
CAST-242ENST00000515063 NPIPB6E9PJ23 425 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 NOP56O00567 594 aaKnown RBP5.4□□□□□ -1.54
CAST-242ENST00000515063 L1CAMP32004 1257 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 GALK1P51570 392 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 YBX1P67809 324 aaKnown RBP5.4□□□□□ -1.54
CAST-242ENST00000515063 SRSF3P84103 164 aaKnown RBP5.4□□□□□ -1.54
CAST-242ENST00000515063 ARHGEF39Q8N4T4 335 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 FAM169BQ8N8A8 192 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 FGD4Q96M96 766 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 JMJD8Q96S16 334 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 ACTR10Q9NZ32 417 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 SMG5Q9UPR3 1016 aaKnown RBP5.4□□□□□ -1.54
CAST-242ENST00000515063 BACE2Q9Y5Z0 518 aa5.4□□□□□ -1.54
CAST-242ENST00000515063 LAMC3Q9Y6N6 1575 aa5.4□□□□□ -1.55
CAST-242ENST00000515063 CUL7Q14999 1698 aa5.4□□□□□ -1.55
CAST-242ENST00000515063 RRBP1Q9P2E9 1410 aaKnown RBP5.4□□□□□ -1.55
CAST-242ENST00000515063 FGD5Q6ZNL6 1462 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 ABCA10Q8WWZ4 1543 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 MYOCOSA0A1B0GUC4 107 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 AURKAO14965 403 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 KRT1P04264 644 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 IFNGR1P15260 489 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 LINC00310P59036 64 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 ARID5AQ03989 594 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 RAB3GAP1Q15042 981 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 CABP7Q86V35 215 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 SIAH1Q8IUQ4 282 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 KCNK12Q9HB15 430 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 TNFRSF12AQ9NP84 129 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 PRKAG3Q9UGI9 489 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 AKT3Q9Y243 479 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 R3HCC1Q9Y3T6 440 aaKnown RBP5.39□□□□□ -1.55
CAST-242ENST00000515063 CUX2O14529 1486 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 ARHGAP35Q9NRY4 1499 aa5.39□□□□□ -1.55
CAST-242ENST00000515063 STXBP3O00186 592 aa5.38□□□□□ -1.55
CAST-242ENST00000515063 NUAK1O60285 661 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 114.1 ms