RNA–Protein interactions for RNA: ENST00000515035.5

TCOF1-214, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 2

Gene TCOF1, Length 5,240 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-214ENST00000515035 HOOK2Q96ED9 719 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 EDC3Q96F86 508 aaKnown RBP14.53□□□□□ -0.08
TCOF1-214ENST00000515035 NLRP1Q9C000 1473 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 ANKRD65E5RJM6 399 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 ATP5JP18859 108 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 LARGE2Q8N3Y3 721 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 UGGT1Q9NYU2 1555 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 USP19O94966 1318 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 KIF24Q5T7B8 1368 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 IKBKBO14920 756 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 ADD1P35611 737 aaKnown RBP14.53□□□□□ -0.08
TCOF1-214ENST00000515035 TADA2BQ86TJ2 420 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 CCDC125Q86Z20 511 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 ZNF654Q8IZM8 581 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 FBXO18Q8NFZ0 1043 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 TTLL3Q9Y4R7 772 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 A0A0D9SFI3 127 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 POC1B-GALNT4F8VUJ3 575 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 ATF7P17544 494 aaPredicted RBP14.53□□□□□ -0.08
TCOF1-214ENST00000515035 ALDH1B1P30837 517 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 TRMT2AQ8IZ69 625 aaKnown RBP14.53□□□□□ -0.08
TCOF1-214ENST00000515035 LZTS2Q9BRK4 669 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 CLIC4Q9Y696 253 aa14.53□□□□□ -0.08
TCOF1-214ENST00000515035 CA8P35219 290 aa14.52□□□□□ -0.08
TCOF1-214ENST00000515035 ATP8A1Q9Y2Q0 1164 aa14.52□□□□□ -0.08
TCOF1-214ENST00000515035 ESRRGP62508 458 aa14.52□□□□□ -0.08
TCOF1-214ENST00000515035 ZNF532Q9HCE3 1301 aa14.52□□□□□ -0.08
TCOF1-214ENST00000515035 BTBD18B2RXH4 712 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 WDR46O15213 610 aaKnown RBP14.52□□□□□ -0.09
TCOF1-214ENST00000515035 RNF8O76064 485 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 RPN1P04843 607 aaKnown RBP14.52□□□□□ -0.09
TCOF1-214ENST00000515035 NR1D1P20393 614 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 ZAP70P43403 619 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 CYP2J2P51589 502 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 PHKG2P15735 406 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 MAGOHBQ96A72 148 aaKnown RBP14.52□□□□□ -0.09
TCOF1-214ENST00000515035 EEF2KMTQ96G04 330 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 MRPL46Q9H2W6 279 aaKnown RBP14.52□□□□□ -0.09
TCOF1-214ENST00000515035 ABCB6Q9NP58 842 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 ZNF148Q9UQR1 794 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 DAAM1Q9Y4D1 1078 aa14.52□□□□□ -0.09
TCOF1-214ENST00000515035 DKC1O60832 514 aaKnown RBP eCLIP14.51□□□□□ -0.09
TCOF1-214ENST00000515035 EIF4A1P60842 406 aaKnown RBP14.51□□□□□ -0.09
TCOF1-214ENST00000515035 ADCY1Q08828 1119 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 RBL2Q08999 1139 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 TCP11X2Q5H9J9 407 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 GPBP1Q86WP2 473 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 SDCCAG3Q96C92 435 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 TXLNGQ9NUQ3 528 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 RTEL1Q9NZ71 1219 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 ADAM21Q9UKJ8 722 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 DDX39AO00148 427 aaKnown RBP14.51□□□□□ -0.09
TCOF1-214ENST00000515035 EEF1GP26641 437 aaKnown RBP14.51□□□□□ -0.09
TCOF1-214ENST00000515035 TMED1Q13445 227 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 PTPN21Q16825 1174 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 CCDC117Q8IWD4 279 aaPredicted RBP14.51□□□□□ -0.09
TCOF1-214ENST00000515035 ANTXR1Q9H6X2 564 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 CNOT10Q9H9A5 744 aaKnown RBP14.51□□□□□ -0.09
TCOF1-214ENST00000515035 C2orf54Q08AI8 447 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 TSC22D3Q99576 134 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 TUBGCP2Q9BSJ2 902 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 HAUS8Q9BT25 410 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 CHUKO15111 745 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 TNNI1P19237 187 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 LPIN2Q92539 896 aa14.51□□□□□ -0.09
TCOF1-214ENST00000515035 KRT3P12035 628 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 GYS2P54840 703 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 PLTPP55058 493 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 GCKRQ14397 625 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 TAF12Q16514 161 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 ARHGEF18Q6ZSZ5 1173 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 ANKRD35Q8N283 1001 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 KDM3AQ9Y4C1 1321 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 SAMD9LQ8IVG5 1584 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 APOEP02649 317 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 DHX9Q08211 1270 aaKnown RBP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 ASPHQ12797 758 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 MMEL1Q495T6 779 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 JADE1Q6IE81 842 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 CMTR1Q8N1G2 835 aaKnown RBP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 CD2BP2O95400 341 aaKnown RBP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 ALS2CLQ60I27 953 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 TMTC3Q6ZXV5 915 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 GSDMAQ96QA5 445 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 SLC39A2Q9NP94 309 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 NOP53Q9NZM5 478 aaKnown RBP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 PTPN22Q9Y2R2 807 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 ERBB4Q15303 1308 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 MROH5Q6ZUA9 1318 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 MAGI3Q5TCQ9 1506 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 BFSP1Q12934 665 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 ACRBPQ8NEB7 543 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 CNOT6LQ96LI5 555 aaKnown RBP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 LRGUKQ96M69 825 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 SPZ1Q9BXG8 430 aa14.5□□□□□ -0.09
TCOF1-214ENST00000515035 AATFQ9NY61 560 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP14.5□□□□□ -0.09
TCOF1-214ENST00000515035 A0A087WWV3 80 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 SMCO2A6NFE2 343 aa14.49□□□□□ -0.09
TCOF1-214ENST00000515035 MAP3K7O43318 606 aa14.49□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms