RNA–Protein interactions for RNA: ENST00000514929.1

SNF8-213, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 5

Gene SNF8, Length 775 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-213ENST00000514929 PRO3102Q9H379 93 aa28.64■■■□□ 2.18
SNF8-213ENST00000514929 RBM8AQ9Y5S9 174 aaKnown RBP28.64■■■□□ 2.18
SNF8-213ENST00000514929 PTPDC1A2A3K4 754 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 E7EWF7 191 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 DUSP11O75319 330 aaKnown RBP28.63■■■□□ 2.17
SNF8-213ENST00000514929 RTP1P59025 263 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 SEC23AQ15436 765 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 SLC39A5Q6ZMH5 540 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 NCOA7Q8NI08 942 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 PHF24Q9UPV7 400 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 ATP11BQ9Y2G3 1177 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 SYNRGQ9UMZ2 1314 aa28.63■■■□□ 2.17
SNF8-213ENST00000514929 ERICH2A1L162 156 aa28.62■■■□□ 2.17
SNF8-213ENST00000514929 DHX16O60231 1041 aaKnown RBP28.62■■■□□ 2.17
SNF8-213ENST00000514929 ADAMTS4O75173 837 aa28.62■■■□□ 2.17
SNF8-213ENST00000514929 KATNBL1Q9H079 304 aa28.62■■■□□ 2.17
SNF8-213ENST00000514929 ADD3Q9UEY8 706 aaKnown RBP28.62■■■□□ 2.17
SNF8-213ENST00000514929 TAF6LQ9Y6J9 622 aa28.62■■■□□ 2.17
SNF8-213ENST00000514929 ASTN1O14525 1302 aa28.62■■■□□ 2.17
SNF8-213ENST00000514929 IFIT3O14879 490 aaKnown RBP28.61■■■□□ 2.17
SNF8-213ENST00000514929 CDC37Q16543 378 aaPredicted RBP28.61■■■□□ 2.17
SNF8-213ENST00000514929 USH1GQ495M9 461 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 BMP2KLQ5H9B9 411 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 ADGRF4Q8IZF3 695 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 CLEC4DQ8WXI8 215 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 PURBQ96QR8 312 aaKnown RBP28.61■■■□□ 2.17
SNF8-213ENST00000514929 ESYT1Q9BSJ8 1104 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 SPC25Q9HBM1 224 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 DNAH12Q6ZR08 3092 aa28.61■■■□□ 2.17
SNF8-213ENST00000514929 FXR1P51114 621 aaKnown RBP eCLIP28.6■■■□□ 2.17
SNF8-213ENST00000514929 SART3Q15020 963 aaKnown RBP28.6■■■□□ 2.17
SNF8-213ENST00000514929 RNF207Q6ZRF8 634 aa28.6■■■□□ 2.17
SNF8-213ENST00000514929 GDF15Q99988 308 aa28.6■■■□□ 2.17
SNF8-213ENST00000514929 ADCY6O43306 1168 aa28.59■■■□□ 2.17
SNF8-213ENST00000514929 CALML3P27482 149 aa28.59■■■□□ 2.17
SNF8-213ENST00000514929 MAGEA10P43363 369 aaPredicted RBP28.59■■■□□ 2.17
SNF8-213ENST00000514929 STOX1Q6ZVD7 989 aa28.59■■■□□ 2.17
SNF8-213ENST00000514929 CCDC136Q96JN2 1154 aa28.59■■■□□ 2.17
SNF8-213ENST00000514929 TSEN34Q9BSV6 310 aaKnown RBP28.59■■■□□ 2.17
SNF8-213ENST00000514929 VAT1LQ9HCJ6 419 aa28.59■■■□□ 2.17
SNF8-213ENST00000514929 PRKAG2Q9UGJ0 569 aa28.59■■■□□ 2.17
SNF8-213ENST00000514929 DDX49Q9Y6V7 483 aaKnown RBP28.59■■■□□ 2.17
SNF8-213ENST00000514929 TRIOBPQ9H2D6 2365 aa28.58■■■□□ 2.17
SNF8-213ENST00000514929 C6orf222P0C671 652 aaPredicted RBP28.58■■■□□ 2.17
SNF8-213ENST00000514929 TNFAIP2Q03169 654 aa28.58■■■□□ 2.17
SNF8-213ENST00000514929 SLC30A10Q6XR72 485 aa28.58■■■□□ 2.17
SNF8-213ENST00000514929 NOL8Q76FK4 1167 aaKnown RBP28.58■■■□□ 2.17
SNF8-213ENST00000514929 EEPD1Q7L9B9 569 aa28.58■■■□□ 2.17
SNF8-213ENST00000514929 LSG1Q9H089 658 aaKnown RBP28.58■■■□□ 2.17
SNF8-213ENST00000514929 LCTP09848 1927 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 A0A1W2PPC1 479 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 A0A1W2PQ45 241 aaPredicted RBP28.57■■■□□ 2.16
SNF8-213ENST00000514929 A0A1W2PQY0 241 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 BMP8BP34820 402 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 ALDH5A1P51649 535 aaPredicted RBP28.57■■■□□ 2.16
SNF8-213ENST00000514929 WTAPQ15007 396 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 SNX17Q15036 470 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 TRIM60Q495X7 471 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 CHST3Q7LGC8 479 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 KLHDC9Q8NEP7 349 aa28.57■■■□□ 2.16
SNF8-213ENST00000514929 RANBP2P49792 3224 aaKnown RBP28.56■■■□□ 2.16
SNF8-213ENST00000514929 KLRF2D3W0D1 207 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 ABCB11O95342 1321 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 ACLYP53396 1101 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 RPS6P62753 249 aaKnown RBP28.56■■■□□ 2.16
SNF8-213ENST00000514929 KCNA10Q16322 511 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 FBXO16Q8IX29 292 aaPredicted RBP28.56■■■□□ 2.16
SNF8-213ENST00000514929 STAG2Q8N3U4 1231 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 JMJD4Q9H9V9 463 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 ANO2Q9NQ90 1003 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 PCDH10Q9P2E7 1040 aa28.56■■■□□ 2.16
SNF8-213ENST00000514929 LRRC37A2A6NM11 1700 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 LOC102724159A0A0B4J2E5 919 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 C11orf97A0A1B0GVM6 126 aaPredicted RBP28.55■■■□□ 2.16
SNF8-213ENST00000514929 MYADML2A6NDP7 307 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 MOXD2PA6NHM9 499 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 GJA9P57773 515 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 PWP2Q15269 919 aaKnown RBP28.55■■■□□ 2.16
SNF8-213ENST00000514929 QRICH1Q2TAL8 776 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 TMEM67Q5HYA8 995 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 C1orf53Q5VUE5 145 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 FBXO11Q86XK2 927 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 PCSK9Q8NBP7 692 aaKnown RBP28.55■■■□□ 2.16
SNF8-213ENST00000514929 MORC4Q8TE76 937 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 NUP133Q8WUM0 1156 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 UPF3AQ9H1J1 476 aaKnown RBP28.55■■■□□ 2.16
SNF8-213ENST00000514929 VTA1Q9NP79 307 aa28.55■■■□□ 2.16
SNF8-213ENST00000514929 CST5P28325 142 aaPredicted RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 IRX5P78411 483 aaPredicted RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 MDM2Q00987 491 aaPredicted RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 MB21D2Q8IYB1 491 aaPredicted RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 MPHOSPH6Q99547 160 aaKnown RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 LBHD1Q9BQE6 289 aaPredicted RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 PRDM5Q9NQX1 630 aaPredicted RBP28.54■■■□□ 2.16
SNF8-213ENST00000514929 STARD7Q9NQZ5 370 aa28.54■■■□□ 2.16
SNF8-213ENST00000514929 PDGFCQ9NRA1 345 aa28.54■■■□□ 2.16
SNF8-213ENST00000514929 MAD2L2Q9UI95 211 aa28.54■■■□□ 2.16
SNF8-213ENST00000514929 GNASQ5JWF2 1037 aa28.53■■■□□ 2.16
SNF8-213ENST00000514929 IQSEC1Q6DN90 963 aa28.53■■■□□ 2.16
SNF8-213ENST00000514929 CCSAPQ6IQ19 270 aaPredicted RBP28.53■■■□□ 2.16
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms