RNA–Protein interactions for RNA: ENST00000514743.5

PDLIM5-219, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 3,356 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-219ENST00000514743 LINC00116Q8NCU8 138 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 PHKBQ93100 1093 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 MYL10Q9BUA6 226 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 CPLX1O14810 134 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 ATP8B1O43520 1251 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 LIFRP42702 1097 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 MAP3K12Q12852 859 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 STX1AQ16623 288 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 SARM1Q6SZW1 724 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 CCDC73Q6ZRK6 1079 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 MFN1Q8IWA4 741 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 CDK5RAP2Q96SN8 1893 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 GBP2P32456 591 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 HDLBPQ00341 1268 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 DDR1Q08345 913 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 MEX3CQ5U5Q3 659 aaKnown RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 SEPT14Q6ZU15 432 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 ARHGAP30Q7Z6I6 1101 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 MICU3Q86XE3 530 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 CCDC144CPQ8IYA2 1237 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 WHAMMQ8TF30 809 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 SPOCK3Q9BQ16 436 aa8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 BARX2Q9UMQ3 279 aaPredicted RBP8.33□□□□□ -1.08
PDLIM5-219ENST00000514743 SPTLC2O15270 562 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 IL4RP24394 825 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 IGHMBP2P38935 993 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 PTPAQ15257 358 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ENOX2Q16206 610 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 CCDC144BQ3MJ40 725 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ERFEQ4G0M1 354 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ANO1Q5XXA6 986 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 KRT40Q6A162 431 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 RCSD1Q6JBY9 416 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 VPS37DQ86XT2 251 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 SYCP3Q8IZU3 236 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 RETREG2Q8NC44 543 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 LSM14AQ8ND56 463 aaKnown RBP8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 KCNG4Q8TDN1 519 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 LMBR1Q8WVP7 490 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 MAP3K14Q99558 947 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ALG1Q9BT22 464 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 NAPBQ9H115 298 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 PLEKHA4Q9H4M7 779 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 STK36Q9NRP7 1315 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 SMIM22K7EJ46 135 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ZBTB43O43298 467 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 CDC25BP30305 580 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ARID5BQ14865 1188 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 KIAA0753Q2KHM9 967 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 ZNF384Q8TF68 577 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC39A3Q9BRY0 314 aa8.32□□□□□ -1.08
PDLIM5-219ENST00000514743 RPSAP08865 295 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 HARSP12081 509 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 TRIM21P19474 475 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 APLP1P51693 650 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 STK38Q15208 465 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 ERCC6LQ2NKX8 1250 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 TMEM67Q5HYA8 995 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 CWF19L1Q69YN2 538 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 POTEDQ86YR6 584 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 OR8K1Q8NGG5 319 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 CLIP3Q96DZ5 547 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 TRPV5Q9NQA5 729 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 A0A0G2JS52 829 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 CBFA2T2O43439 604 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 AHCYL1O43865 530 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 ONECUT3O60422 494 aaPredicted RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC39A14Q15043 492 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 SF3B3Q15393 1217 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 PACS1Q6VY07 963 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 PTF1AQ7RTS3 328 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 MIGA1Q8NAN2 632 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 C1orf131Q8NDD1 294 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 BUD13Q9BRD0 619 aaKnown RBP eCLIP8.31□□□□□ -1.084e-6■□□□□ 11.2
PDLIM5-219ENST00000514743 YIPF3Q9GZM5 350 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 ACBD3Q9H3P7 528 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 EXOC1Q9NV70 894 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 HPSEQ9Y251 543 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 SLC4A4Q9Y6R1 1079 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 EP400Q96L91 3159 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 GOLGA8AA7E2F4 631 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 PFKFB1P16118 471 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 GUCY1A2P33402 732 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 KCNQ4P56696 695 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 ARHGAP29Q52LW3 1261 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 SMIM5Q71RC9 77 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 FILIP1Q7Z7B0 1213 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 PMM1Q92871 262 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 NACC2Q96BF6 587 aa8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 RBM41Q96IZ5 413 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 RSRC1Q96IZ7 334 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 RIOK1Q9BRS2 568 aaKnown RBP8.31□□□□□ -1.08
PDLIM5-219ENST00000514743 FAM237AA0A1B0GTK4 181 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 HMGB1P1B2RPK0 211 aaPredicted RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 ZEB2O60315 1214 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 VIL1P09327 827 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 EZRP15311 586 aaKnown RBP8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 GNAT2P19087 354 aa8.3□□□□□ -1.08
PDLIM5-219ENST00000514743 GYG1P46976 350 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 171.6 ms