RNA–Protein interactions for RNA: ENST00000514536.5

USP46-209, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 2

Gene USP46, Length 1,589 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-209ENST00000514536 KLF18A0A0U1RQI7 1052 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 GNAQP50148 359 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 CACNB2Q08289 660 aaPredicted RBP16.21■□□□□ 0.19
USP46-209ENST00000514536 APOBRQ0VD83 1088 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 NSMFQ6X4W1 530 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 PIBF1Q8WXW3 757 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 MTMR8Q96EF0 704 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 PIGSQ96S52 555 aa16.21■□□□□ 0.19
USP46-209ENST00000514536 UPF3BQ9BZI7 483 aaKnown RBP16.21■□□□□ 0.19
USP46-209ENST00000514536 DIS3Q9Y2L1 958 aaKnown RBP16.21■□□□□ 0.19
USP46-209ENST00000514536 NFIBO00712 420 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 ZBTB43O43298 467 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 PLEKHA8P1O95397 391 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 PRKAR2AP13861 404 aaKnown RBP16.21■□□□□ 0.18
USP46-209ENST00000514536 CYP2C19P33261 490 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 OLFML2BQ68BL8 750 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 FBXO11Q86XK2 927 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 HOMER1Q86YM7 354 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 CMTR1Q8N1G2 835 aaKnown RBP16.21■□□□□ 0.18
USP46-209ENST00000514536 SRBD1Q8N5C6 995 aaKnown RBP16.21■□□□□ 0.18
USP46-209ENST00000514536 CLEC4DQ8WXI8 215 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 LZTS2Q9BRK4 669 aa16.21■□□□□ 0.18
USP46-209ENST00000514536 POTEFA5A3E0 1075 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 POTEB2H3BUK9 544 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 ZBTB5O15062 677 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 IGHA2P01877 340 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 ANAPC15P60006 121 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 CNTN2Q02246 1040 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 MAP3K21Q5TCX8 1036 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 FBXL16Q8N461 479 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 AMNQ9BXJ7 453 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 HMX1Q9NP08 348 aaPredicted RBP16.2■□□□□ 0.18
USP46-209ENST00000514536 CYP39A1Q9NYL5 469 aa16.2■□□□□ 0.18
USP46-209ENST00000514536 RPTORQ8N122 1335 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 PPP1R11O60927 126 aaPredicted RBP16.19■□□□□ 0.18
USP46-209ENST00000514536 SLC34A2O95436 690 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 SMARCA1P28370 1054 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 BAATQ14032 418 aaPredicted RBP16.19■□□□□ 0.18
USP46-209ENST00000514536 CCDC82Q8N4S0 544 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 AGXT2Q9BYV1 514 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 PDRG1Q9NUG6 133 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 PFASO15067 1338 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 ABCB11O95342 1321 aa16.19■□□□□ 0.18
USP46-209ENST00000514536 PNMA6FA0A0J9YX94 578 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 PTPDC1A2A3K4 754 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 EN2P19622 333 aaPredicted RBP16.18■□□□□ 0.18
USP46-209ENST00000514536 RTN1Q16799 776 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 PRAMEF19Q5SWL8 479 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 TMTC3Q6ZXV5 915 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 FAM133AQ8N9E0 248 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 PURBQ96QR8 312 aaKnown RBP16.18■□□□□ 0.18
USP46-209ENST00000514536 XRN2Q9H0D6 950 aaKnown RBP eCLIP16.18■□□□□ 0.18
USP46-209ENST00000514536 MRPL11Q9Y3B7 192 aaKnown RBP16.18■□□□□ 0.18
USP46-209ENST00000514536 PCDHA1Q9Y5I3 950 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 PDE4DIPQ5VU43 2346 aa16.18■□□□□ 0.18
USP46-209ENST00000514536 GOLGA8AA7E2F4 631 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 GOLGA8BA8MQT2 603 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 GJB1P08034 283 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 CCND3P30281 292 aaPredicted RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 TOB2Q14106 344 aaPredicted RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 RNF207Q6ZRF8 634 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 TBC1D5Q92609 795 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 FGD4Q96M96 766 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 DEFB118Q96PH6 123 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 TINF2Q9BSI4 451 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 RBM28Q9NW13 759 aaKnown RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 SOWAHBA6NEL2 793 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 CALML3P27482 149 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 CNGA1P29973 690 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 CDC27P30260 824 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 ZNF467Q7Z7K2 595 aaPredicted RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 TRPV1Q8NER1 839 aa16.17■□□□□ 0.18
USP46-209ENST00000514536 PAK6Q9NQU5 681 aaPredicted RBP16.17■□□□□ 0.18
USP46-209ENST00000514536 ZNF236Q9UL36 1845 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 SMCHD1A6NHR9 2005 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 CENPFP49454 3210 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 hCG_1642624A0A1W2PR95 340 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 SGPL1O95470 568 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 CYBAP13498 195 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 ADD1P35611 737 aaKnown RBP16.16■□□□□ 0.18
USP46-209ENST00000514536 METAP2P50579 478 aaKnown RBP eCLIP16.16■□□□□ 0.18
USP46-209ENST00000514536 RCAN1P53805 252 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 EVCP57679 992 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 RPS6P62753 249 aaKnown RBP16.16■□□□□ 0.18
USP46-209ENST00000514536 MAMDC4Q6UXC1 1216 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 SLC30A10Q6XR72 485 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 MCF2L2Q86YR7 1114 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 RGS22Q8NE09 1264 aa16.16■□□□□ 0.18
USP46-209ENST00000514536 U2AF1L4Q8WU68 220 aaKnown RBP16.16■□□□□ 0.18
USP46-209ENST00000514536 ZNFX1Q9P2E3 1918 aaKnown RBP16.16■□□□□ 0.18
USP46-209ENST00000514536 SNAI1O95863 264 aaPredicted RBP16.15■□□□□ 0.18
USP46-209ENST00000514536 PDIA3P30101 505 aaKnown RBP16.15■□□□□ 0.18
USP46-209ENST00000514536 GJA8P48165 433 aa16.15■□□□□ 0.18
USP46-209ENST00000514536 TRAF1Q13077 416 aa16.15■□□□□ 0.18
USP46-209ENST00000514536 MSL3Q8N5Y2 521 aaKnown RBP16.15■□□□□ 0.18
USP46-209ENST00000514536 IL17RAQ96F46 866 aa16.15■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms