RNA–Protein interactions for RNA: ENST00000514469.1

HMGXB3-205, Transcript of HMG-box containing 3, humanhuman

TSL 5

Gene HMGXB3, Length 975 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-205ENST00000514469 IQCA1Q86XH1 822 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 PNMA1Q8ND90 353 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 ANKS1AQ92625 1134 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 ZSCAN10Q96SZ4 725 aaPredicted RBP12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 UBE2OQ9C0C9 1292 aaKnown RBP12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 UPF3AQ9H1J1 476 aaKnown RBP12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 CNNM2Q9H8M5 875 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 PDLIM7Q9NR12 457 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 TNKSO95271 1327 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 WDR19Q8NEZ3 1342 aa12.28□□□□□ -0.44
HMGXB3-205ENST00000514469 MYADML2A6NDP7 307 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 MOXD2PA6NHM9 499 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 NFIBO00712 420 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 CHMLP26374 656 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 ACLYP53396 1101 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 GJA9P57773 515 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 NKX3-2P78367 333 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 LRIT3Q3SXY7 679 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 NSMFQ6X4W1 530 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 ENAHQ8N8S7 591 aaPredicted RBP12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 MORC4Q8TE76 937 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 KRT23Q9C075 422 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 KAT14Q9H8E8 782 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 PRKAG2Q9UGJ0 569 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 PNMA2Q9UL42 364 aa12.27□□□□□ -0.45
HMGXB3-205ENST00000514469 LOC102724159A0A0B4J2E5 919 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 C11orf97A0A1B0GVM6 126 aaPredicted RBP12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 CTAGE5O15320 804 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 PWP2Q15269 919 aaKnown RBP12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 KCNA10Q16322 511 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 SLC30A10Q6XR72 485 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 RUFY2Q8WXA3 655 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 CLEC4DQ8WXI8 215 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 LRCH3Q96II8 777 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 LBHD1Q9BQE6 289 aaPredicted RBP12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 ZSWIM5Q9P217 1185 aa12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 DDX49Q9Y6V7 483 aaKnown RBP12.26□□□□□ -0.45
HMGXB3-205ENST00000514469 TRIM43BA6NCK2 446 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 SGSM2O43147 1006 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 C6orf222P0C671 652 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 GOLGA8HP0CJ92 632 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 ALDH5A1P51649 535 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 IRX5P78411 483 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 PTH1RQ03431 593 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 TLE2Q04725 743 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 BAATQ14032 418 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 ASPRV1Q53RT3 343 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 TAPT1Q6NXT6 567 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 ANKRD33Q7Z3H0 272 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 SH3RF1Q7Z6J0 888 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 FBXO16Q8IX29 292 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 PCSK9Q8NBP7 692 aaKnown RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 NUP133Q8WUM0 1156 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 TRIM43Q96BQ3 446 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 PURBQ96QR8 312 aaKnown RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 CPVLQ9H3G5 476 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 SPC25Q9HBM1 224 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 VTA1Q9NP79 307 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 PRDM5Q9NQX1 630 aaPredicted RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 STARD7Q9NQZ5 370 aa12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 GNEQ9Y223 722 aaKnown RBP12.25□□□□□ -0.45
HMGXB3-205ENST00000514469 PTPDC1A2A3K4 754 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 MCM3APO60318 1980 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 ELP1O95163 1332 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 ASGR1P07306 291 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 CYP21A2P08686 494 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 CLTBP09497 229 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 LAMA2P24043 3122 aaKnown RBP12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 TNFAIP2Q03169 654 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 SEC23AQ15436 765 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 CDC37Q16543 378 aaPredicted RBP12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 CYB5R4Q7L1T6 521 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 TLK2Q86UE8 772 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 TOX2Q96NM4 488 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 UBAC1Q9BSL1 405 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 UBA5Q9GZZ9 404 aa12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 ADD3Q9UEY8 706 aaKnown RBP12.24□□□□□ -0.45
HMGXB3-205ENST00000514469 KIAA0355O15063 1070 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 PQBP1O60828 265 aaKnown RBP12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 PARP1P09874 1014 aaKnown RBP12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 SMPD1P17405 629 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 EDNRBP24530 442 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 RNF207Q6ZRF8 634 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 ADGRF4Q8IZF3 695 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 BADQ92934 168 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 GLT1D1Q96MS3 346 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 MAF1Q9H063 256 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 PDGFCQ9NRA1 345 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 U3KPZ7 1027 aaPredicted RBP12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 SMCHD1A6NHR9 2005 aa12.23□□□□□ -0.45
HMGXB3-205ENST00000514469 ABCB11O95342 1321 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 MROH7Q68CQ1 1323 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 A0A0U1RQG5 324 aaPredicted RBP12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 PTGS1P23219 599 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 ITGB8P26012 769 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 CALML3P27482 149 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 CDK7P50613 346 aa12.22□□□□□ -0.45
HMGXB3-205ENST00000514469 RPS6P62753 249 aaKnown RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms