RNA–Protein interactions for RNA: ENST00000513806.1

HTT-213, Transcript of huntingtin, humanhuman

TSL 5

Gene HTT, Length 432 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-213ENST00000513806 CWC22Q9HCG8 908 aaKnown RBP13.11□□□□□ -0.31
HTT-213ENST00000513806 DDX49Q9Y6V7 483 aaKnown RBP13.11□□□□□ -0.31
HTT-213ENST00000513806 CCDC196A0A1B0GTZ2 297 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 PTPDC1A2A3K4 754 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 TNPO2O14787 897 aaKnown RBP13.1□□□□□ -0.31
HTT-213ENST00000513806 OPLAHO14841 1288 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 ATP2A1O14983 1001 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 PRPF3O43395 683 aaKnown RBP13.1□□□□□ -0.31
HTT-213ENST00000513806 PGK2P07205 417 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 FDPSP14324 419 aaKnown RBP13.1□□□□□ -0.31
HTT-213ENST00000513806 OAZ1P54368 228 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 CCNA1P78396 465 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 NSMFQ6X4W1 530 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 PLEKHH3Q7Z736 793 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 ZSCAN31Q96LW9 406 aaPredicted RBP13.1□□□□□ -0.31
HTT-213ENST00000513806 AMNQ9BXJ7 453 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 SEC63Q9UGP8 760 aaKnown RBP13.1□□□□□ -0.31
HTT-213ENST00000513806 PCDHA1Q9Y5I3 950 aa13.1□□□□□ -0.31
HTT-213ENST00000513806 ZNF236Q9UL36 1845 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 STXBP3O00186 592 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 FDX1P10109 184 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 SMARCA1P28370 1054 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 FCGRTP55899 365 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 PRKCZQ05513 592 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 SLC30A10Q6XR72 485 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 SPRYD3Q8NCJ5 442 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 ERO1AQ96HE7 468 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 MMP19Q99542 508 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 ACAD9Q9H845 621 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 A1CFQ9NQ94 594 aaKnown RBP13.09□□□□□ -0.31
HTT-213ENST00000513806 SH2B1Q9NRF2 756 aaPredicted RBP13.09□□□□□ -0.31
HTT-213ENST00000513806 VPS54Q9P1Q0 977 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 ORC3Q9UBD5 711 aaPredicted RBP13.09□□□□□ -0.31
HTT-213ENST00000513806 TRIM17Q9Y577 477 aa13.09□□□□□ -0.31
HTT-213ENST00000513806 MYH7BA7E2Y1 1941 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 COBLO75128 1261 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 SLC25A27O95847 323 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 SCG2P13521 617 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 CYP2B6P20813 491 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 PTPREP23469 700 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 ADORA2AP29274 412 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 MAPK4P31152 587 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 HOXA13P31271 388 aaPredicted RBP13.08□□□□□ -0.32
HTT-213ENST00000513806 AKAP17AQ02040 695 aaKnown RBP13.08□□□□□ -0.32
HTT-213ENST00000513806 CNTN2Q02246 1040 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 KIF22Q14807 665 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 PPP2R5BQ15173 497 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 UBE2SQ16763 222 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 PFKFB3Q16875 520 aaPredicted RBP13.08□□□□□ -0.32
HTT-213ENST00000513806 OTOP1Q7RTM1 612 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 SHCBP1Q8NEM2 672 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 NPLOC4Q8TAT6 608 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 RNF26Q9BY78 433 aaPredicted RBP13.08□□□□□ -0.32
HTT-213ENST00000513806 MROH8Q9H579 483 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 COL20A1Q9P218 1284 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 GJD2Q9UKL4 321 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 ABCB11O95342 1321 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 LRRC37A2A6NM11 1700 aa13.08□□□□□ -0.32
HTT-213ENST00000513806 K7ELQ4 463 aaPredicted RBP13.07□□□□□ -0.32
HTT-213ENST00000513806 CFBP00751 764 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 CALML3P27482 149 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 NAPAP54920 295 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 GUCY1B3Q02153 619 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 BAATQ14032 418 aaPredicted RBP13.07□□□□□ -0.32
HTT-213ENST00000513806 GRB14Q14449 540 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 CCL14Q16627 93 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 NOM1Q5C9Z4 860 aaKnown RBP13.07□□□□□ -0.32
HTT-213ENST00000513806 MORN1Q5T089 497 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 CPLX2Q6PUV4 134 aaKnown RBP13.07□□□□□ -0.32
HTT-213ENST00000513806 HSCBQ8IWL3 235 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 TRIM22Q8IYM9 498 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 ANKRD35Q8N283 1001 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 CHST13Q8NET6 341 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 SMARCC2Q8TAQ2 1214 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 SNX21Q969T3 373 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 PGBD1Q96JS3 809 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 KCNJ14Q9UNX9 436 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 MRPL11Q9Y3B7 192 aaKnown RBP13.07□□□□□ -0.32
HTT-213ENST00000513806 IVNS1ABPQ9Y6Y0 642 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 HTTP42858 3142 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 KIAA1217Q5T5P2 1943 aa13.07□□□□□ -0.32
HTT-213ENST00000513806 DEXIO95424 95 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 FCER1AP12319 257 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 MCM2P49736 904 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 FLT3LGP49771 235 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 TKFCQ3LXA3 575 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 USP17L6PQ6QN14 398 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 FGD4Q96M96 766 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 ALG1Q9BT22 464 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 TSHZ2Q9NRE2 1034 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 TMEM260Q9NX78 707 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 BARHL2Q9NY43 387 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 CYP39A1Q9NYL5 469 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 FLRT1Q9NZU1 646 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 SRRDQ9UH36 339 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 PTCH2Q9Y6C5 1203 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 CENPFP49454 3210 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 ASTN1O14525 1302 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 STK36Q9NRP7 1315 aa13.06□□□□□ -0.32
HTT-213ENST00000513806 DOCK5Q9H7D0 1870 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms