RNA–Protein interactions for RNA: ENST00000513639.5

HTT-212, Transcript of huntingtin, humanhuman

TSL 2

Gene HTT, Length 259 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HTT-212ENST00000513639 SYDE2Q5VT97 1194 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 CCDC174Q6PII3 467 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 NOL8Q76FK4 1167 aaKnown RBP8.57□□□□□ -1.04
HTT-212ENST00000513639 ARMCX2Q7L311 632 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 KLHDC9Q8NEP7 349 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 ANKS1AQ92625 1134 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 GLT1D1Q96MS3 346 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 KRT23Q9C075 422 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 AP5M1Q9H0R1 490 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 RANBP17Q9H2T7 1088 aaKnown RBP8.57□□□□□ -1.04
HTT-212ENST00000513639 GPCPD1Q9NPB8 672 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 A1CFQ9NQ94 594 aaKnown RBP8.57□□□□□ -1.04
HTT-212ENST00000513639 CYP39A1Q9NYL5 469 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 Q9Y3F1 56 aa8.57□□□□□ -1.04
HTT-212ENST00000513639 MYH8P13535 1937 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 A0A1W2PQ45 241 aaPredicted RBP8.56□□□□□ -1.04
HTT-212ENST00000513639 A0A1W2PQY0 241 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 ADAMTS4O75173 837 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 CABYRO75952 493 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 C6orf222P0C671 652 aaPredicted RBP8.56□□□□□ -1.04
HTT-212ENST00000513639 PDHBP11177 359 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 CST5P28325 142 aaPredicted RBP8.56□□□□□ -1.04
HTT-212ENST00000513639 SLC16A2P36021 539 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 GJA9P57773 515 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 ZNF543Q08ER8 600 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 TRDNQ13061 729 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 TRIM60Q495X7 471 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 NSMFQ6X4W1 530 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 ANKRD33Q7Z3H0 272 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 RGS22Q8NE09 1264 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 ZSCAN10Q96SZ4 725 aaPredicted RBP8.56□□□□□ -1.04
HTT-212ENST00000513639 KAT14Q9H8E8 782 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 PRDM5Q9NQX1 630 aaPredicted RBP8.56□□□□□ -1.04
HTT-212ENST00000513639 STARD7Q9NQZ5 370 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 TMEM39AQ9NV64 488 aa8.56□□□□□ -1.04
HTT-212ENST00000513639 MROH7Q68CQ1 1323 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 ZNF236Q9UL36 1845 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 ZNFX1Q9P2E3 1918 aaKnown RBP8.55□□□□□ -1.04
HTT-212ENST00000513639 SOWAHBA6NEL2 793 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 KDM4AO75164 1064 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 ASGR1P07306 291 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 CLTBP09497 229 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 SNHG28P0DPA3 235 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 RAG1P15918 1043 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 SNAP25P60880 206 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 NKX3-2P78367 333 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 BAATQ14032 418 aaPredicted RBP8.55□□□□□ -1.04
HTT-212ENST00000513639 BRDTQ58F21 947 aaPredicted RBP8.55□□□□□ -1.04
HTT-212ENST00000513639 CCSAPQ6IQ19 270 aaPredicted RBP8.55□□□□□ -1.04
HTT-212ENST00000513639 TTBK2Q6IQ55 1244 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 PNMA1Q8ND90 353 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 UBAC1Q9BSL1 405 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 UPF3AQ9H1J1 476 aaKnown RBP8.55□□□□□ -1.04
HTT-212ENST00000513639 VTA1Q9NP79 307 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 ZSWIM5Q9P217 1185 aa8.55□□□□□ -1.04
HTT-212ENST00000513639 SYNRGQ9UMZ2 1314 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 SMCHD1A6NHR9 2005 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 PTPDC1A2A3K4 754 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 TRIM43BA6NCK2 446 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 KIAA0355O15063 1070 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 DYNC1LI2O43237 492 aaPredicted RBP8.54□□□□□ -1.04
HTT-212ENST00000513639 PQBP1O60828 265 aaKnown RBP8.54□□□□□ -1.04
HTT-212ENST00000513639 CDK7P50613 346 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 TRAF1Q13077 416 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 ASPRV1Q53RT3 343 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 MUM1L1Q5H9M0 696 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 TTC22Q5TAA0 569 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 FAM109BQ6ICB4 259 aaPredicted RBP8.54□□□□□ -1.04
HTT-212ENST00000513639 RNF207Q6ZRF8 634 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 KIAA1211Q6ZU35 1233 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 MCF2L2Q86YR7 1114 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 TBC1D10CQ8IV04 446 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 DEFB123Q8N688 67 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 DNERQ8NFT8 737 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 MORC4Q8TE76 937 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 BADQ92934 168 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 TRIM43Q96BQ3 446 aaPredicted RBP8.54□□□□□ -1.04
HTT-212ENST00000513639 LRCH3Q96II8 777 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 FGD4Q96M96 766 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 CIZ1Q9ULV3 898 aaPredicted RBP8.54□□□□□ -1.04
HTT-212ENST00000513639 FRMPD2Q68DX3 1309 aaPredicted RBP8.54□□□□□ -1.04
HTT-212ENST00000513639 WDR19Q8NEZ3 1342 aa8.54□□□□□ -1.04
HTT-212ENST00000513639 GREB1LQ9C091 1923 aaPredicted RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 A0A0U1RQG5 324 aaPredicted RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 B4E1Z4 1266 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 ARVCFO00192 962 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 SOX1O00570 391 aaPredicted RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 TLR3O15455 904 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 TIMP1P01033 207 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 PARP1P09874 1014 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 FAAP100Q0VG06 881 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 SART3Q15020 963 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 FSCN1Q16658 493 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 IFIT1BQ5T764 474 aaKnown RBP8.53□□□□□ -1.04
HTT-212ENST00000513639 TAPT1Q6NXT6 567 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 ZKSCAN3Q9BRR0 538 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 WDR11Q9BZH6 1224 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 UBA5Q9GZZ9 404 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 KATNBL1Q9H079 304 aa8.53□□□□□ -1.04
HTT-212ENST00000513639 PDLIM7Q9NR12 457 aa8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms