RNA–Protein interactions for RNA: ENST00000513506.5

POLR2J3-218, Transcript of RNA polymerase II subunit J3, humanhuman

TSL 5

Gene POLR2J3, Length 958 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3-218ENST00000513506 CCDC144CPQ8IYA2 1237 aa17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 TRMT44Q8IYL2 757 aaKnown RBP17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 VAT1LQ9HCJ6 419 aa17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 MAP3K20Q9NYL2 800 aaKnown RBP17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 GABRQQ9UN88 632 aa17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 MRPL11Q9Y3B7 192 aaKnown RBP17.99■□□□□ 0.47
POLR2J3-218ENST00000513506 PFASO15067 1338 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 LOC102724159A0A0B4J2E5 919 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 hCG_1984214I3L0E3 225 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 OPLAHO14841 1288 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 PRPF3O43395 683 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 DHX16O60231 1041 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 ALAS1P13196 640 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 RGS2P41220 211 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 KCTD2Q14681 263 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 PWP2Q15269 919 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 ME3Q16798 604 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 ZNF792Q3KQV3 632 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 MUM1L1Q5H9M0 696 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 ZNF467Q7Z7K2 595 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 FAM177A1Q8N128 213 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 ZNF713Q8N859 430 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 ZSCAN31Q96LW9 406 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 MMP19Q99542 508 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 RNF26Q9BY78 433 aaPredicted RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 A1CFQ9NQ94 594 aaKnown RBP17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 PCDHA1Q9Y5I3 950 aa17.98■□□□□ 0.47
POLR2J3-218ENST00000513506 MGAMO43451 1857 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 COBLO75128 1261 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 MCM2P49736 904 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 SCRN1Q12765 414 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 CMTR1Q8N1G2 835 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 MSL3Q8N5Y2 521 aaKnown RBP17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 FAM133AQ8N9E0 248 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 GTF3C6Q969F1 213 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 APBA2Q99767 749 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 SLKQ9H2G2 1235 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 SH2B1Q9NRF2 756 aaPredicted RBP17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 CYP39A1Q9NYL5 469 aa17.97■□□□□ 0.47
POLR2J3-218ENST00000513506 PLXNB2O15031 1838 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 NFIBO00712 420 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 ST18O60284 1047 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 HSD17B4P51659 736 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 PKN1Q16512 942 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 COL13A1Q5TAT6 717 aaPredicted RBP17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 OLFML2BQ68BL8 750 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 MAMDC4Q6UXC1 1216 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 MCF2L2Q86YR7 1114 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 SLAIN1Q8ND83 568 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 ARMC5Q96C12 935 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 LARP6Q9BRS8 491 aaKnown RBP17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 NCOA5Q9HCD5 579 aaKnown RBP17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 SLC5A4Q9NY91 659 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 SEC63Q9UGP8 760 aaKnown RBP17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 PTCH2Q9Y6C5 1203 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 V9GY48 417 aaPredicted RBP17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 DOCK3Q8IZD9 2030 aa17.96■□□□□ 0.47
POLR2J3-218ENST00000513506 CCT2P78371 535 aaKnown RBP17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 PFKFB3Q16875 520 aaPredicted RBP17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 PPP1R18Q6NYC8 613 aa17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 CPLX2Q6PUV4 134 aaKnown RBP17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 HOMER1Q86YM7 354 aa17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 FGD4Q96M96 766 aa17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 MCOLN1Q9GZU1 580 aa17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 ZSWIM8A7E2V4 1837 aa17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 STK36Q9NRP7 1315 aa17.95■□□□□ 0.46
POLR2J3-218ENST00000513506 PIK3CDO00329 1044 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 CDKL5O76039 1030 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 LARGE1O95461 756 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 CTDNEP1O95476 244 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 MAP3K21Q5TCX8 1036 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 WDR78Q5VTH9 848 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 ANKRD35Q8N283 1001 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 CCDC82Q8N4S0 544 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 NPLOC4Q8TAT6 608 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 MORC4Q8TE76 937 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 HOMER2Q9NSB8 354 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 BARHL2Q9NY43 387 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 NRBP1Q9UHY1 535 aa17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 NAP1L2Q9ULW6 460 aaPredicted RBP17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 BAZ2BQ9UIF8 2168 aaKnown RBP17.94■□□□□ 0.46
POLR2J3-218ENST00000513506 ESYT2A0FGR8 921 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 ADCY3O60266 1144 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 SCG2P13521 617 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 GRK4P32298 578 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 ST3GAL1Q11201 340 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 USH1GQ495M9 461 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 DPP9Q86TI2 863 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 RAET1EQ8TD07 263 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 DDX11Q96FC9 970 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 MAML3Q96JK9 1138 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 LLPHQ9BRT6 129 aaKnown RBP17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 CWC22Q9HCG8 908 aaKnown RBP17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 SH3GLB2Q9NR46 395 aa17.93■□□□□ 0.46
POLR2J3-218ENST00000513506 POTEB2H3BUK9 544 aa17.92■□□□□ 0.46
POLR2J3-218ENST00000513506 STXBP3O00186 592 aa17.92■□□□□ 0.46
POLR2J3-218ENST00000513506 CPLX1O14810 134 aa17.92■□□□□ 0.46
POLR2J3-218ENST00000513506 CD2BP2O95400 341 aaKnown RBP17.92■□□□□ 0.46
POLR2J3-218ENST00000513506 TAL1P17542 331 aaPredicted RBP17.92■□□□□ 0.46
POLR2J3-218ENST00000513506 CYP2B6P20813 491 aa17.92■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms