RNA–Protein interactions for RNA: ENST00000512476.1

TRAPPC11-209, Transcript of trafficking protein particle complex 11, humanhuman

TSL 1 (best) BASIC

Gene TRAPPC11, Length 2,546 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC11-209ENST00000512476 TEX9Q8N6V9 391 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 CASKIN1Q8WXD9 1431 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 ACO2Q99798 780 aaKnown RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 FYCO1Q9BQS8 1478 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 TCF7L1Q9HCS4 588 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 SUN2Q9UH99 717 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 GJD2Q9UKL4 321 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 ANKRD6Q9Y2G4 727 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 AP1G1O43747 822 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 TGDSO95455 350 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 APBA3O96018 575 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 HSD3B1P14060 373 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 RGS3P49796 1198 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 RAB15P59190 212 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 CENPCQ03188 943 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 TAF5Q15542 800 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 SNAP47Q5SQN1 464 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 KAZNQ674X7 775 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 FAM196AQ6ZSG2 479 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 CHST15Q7LFX5 561 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 DZIP3Q86Y13 1208 aaKnown RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 GOLGA6L2Q8N9W4 650 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 GABPB2Q8TAK5 448 aaPredicted RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC35G2Q8TBE7 412 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 JAKMIP1Q96N16 626 aaKnown RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPP1R16BQ96T49 567 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 ARHGAP9Q9BRR9 750 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 ISCA1Q9BUE6 129 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 TSPY26PQ9H489 355 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 BLOC1S6Q9UL45 172 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 USP20Q9Y2K6 914 aa7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 TNPO3Q9Y5L0 923 aaKnown RBP7.21□□□□□ -1.26
TRAPPC11-209ENST00000512476 KIAA0556O60303 1618 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 DISP1Q96F81 1524 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA12O60330 932 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 GRIN3BO60391 1043 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLITRK5O94991 958 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 TBC1D8O95759 1140 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 F13A1P00488 732 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 CCDC175P0C221 793 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 CKMT1AP12532 417 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 SKILP12757 684 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 KCNA6P17658 529 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 GUCY2CP25092 1073 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PRIM2P49643 509 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 CLCQ05315 142 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 DGKZQ13574 1117 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 HECTD3Q5T447 861 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 TMTC1Q8IUR5 882 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 ANKRD52Q8NB46 1076 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 HDAC2Q92769 488 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA9Q9Y5G4 932 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA8Q9Y5G5 932 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA7Q9Y5G6 932 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA6Q9Y5G7 932 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA3Q9Y5H0 932 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PCDHGA2Q9Y5H1 932 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 TIAM1Q13009 1591 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 LTBP3Q9NS15 1303 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 MASP2O00187 686 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 RPL17P18621 184 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 SLC12A2P55011 1212 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 MRPS35P82673 323 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PDE4BQ07343 736 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 SHQ1Q6PI26 577 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPM1NQ8N819 430 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 NEK9Q8TD19 979 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 TSGA13Q96PP4 275 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 CRBNQ96SW2 442 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 CGNQ9P2M7 1197 aaKnown RBP7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 ITGB1BP2Q9UKP3 347 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 ITM2BQ9Y287 266 aa7.2□□□□□ -1.26
TRAPPC11-209ENST00000512476 CFAP43Q8NDM7 1665 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 C17orf113A0A1B0GUU1 675 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 FSCN2O14926 492 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 KIF5CO60282 957 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 CPEP16870 476 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 HSPA6P17066 643 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TFE3P19532 575 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GRK2P25098 689 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 CYP2C19P33261 490 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 ERVK-21P61565 698 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 PPFIA1Q13136 1202 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 SMC1AQ14683 1233 aaKnown RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TERF2Q15554 542 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZYXQ15942 572 aaKnown RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 PROX2Q3B8N5 592 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 CEP57L1Q8IYX8 460 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 ZBTB34Q8NCN2 500 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 SSH3Q8TE77 659 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 DPF3Q92784 378 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 GMCL1Q96IK5 515 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 ASB2Q96Q27 587 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 TTC1Q99614 292 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 ESF1Q9H501 851 aaKnown RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 ACAD9Q9H845 621 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 HELLSQ9NRZ9 838 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 BMP2KQ9NSY1 1161 aaPredicted RBP7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 HOXC10Q9NYD6 342 aa7.19□□□□□ -1.26
TRAPPC11-209ENST00000512476 NKIRAS2Q9NYR9 191 aa7.19□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 84.7 ms