RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 MYO7AQ13402 2215 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 PLXNA3P51805 1871 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 SIP14410 1827 aa11.08□□□□□ -0.64
NUP54-211ENST00000512151 KMT2EQ8IZD2 1858 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 TANC1Q9C0D5 1861 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 LINC01553A4QN01 128 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 DYNC1LI2O43237 492 aaPredicted RBP11.07□□□□□ -0.64
NUP54-211ENST00000512151 IDH1O75874 414 aaKnown RBP11.07□□□□□ -0.64
NUP54-211ENST00000512151 IQCF3P0C7M6 154 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 SLC4A3P48751 1232 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 DEFB103AP81534 67 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 GPNMBQ14956 572 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 TCTN1Q2MV58 587 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 PUS10Q3MIT2 529 aaKnown RBP11.07□□□□□ -0.64
NUP54-211ENST00000512151 ADHFE1Q8IWW8 467 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 NUP88Q99567 741 aaPredicted RBP11.07□□□□□ -0.64
NUP54-211ENST00000512151 TEX13BQ9BXU2 312 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 FTOQ9C0B1 505 aaKnown RBP eCLIP11.07□□□□□ -0.64
NUP54-211ENST00000512151 PDGFCQ9NRA1 345 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 FAM186AA6NE01 2351 aa11.07□□□□□ -0.64
NUP54-211ENST00000512151 EEF2P13639 858 aaKnown RBP11.06□□□□□ -0.64
NUP54-211ENST00000512151 RFC2P35250 354 aa11.06□□□□□ -0.64
NUP54-211ENST00000512151 WDR5P61964 334 aaKnown RBP11.06□□□□□ -0.64
NUP54-211ENST00000512151 HERC4Q5GLZ8 1057 aaPredicted RBP11.06□□□□□ -0.64
NUP54-211ENST00000512151 DHX30Q7L2E3 1194 aaKnown RBP eCLIP11.06□□□□□ -0.64
NUP54-211ENST00000512151 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.06□□□□□ -0.64
NUP54-211ENST00000512151 TGS1Q96RS0 853 aaKnown RBP11.06□□□□□ -0.64
NUP54-211ENST00000512151 SEZ6LQ9BYH1 1024 aa11.06□□□□□ -0.64
NUP54-211ENST00000512151 ANTXR1Q9H6X2 564 aa11.06□□□□□ -0.64
NUP54-211ENST00000512151 MCM9Q9NXL9 1143 aa11.06□□□□□ -0.64
NUP54-211ENST00000512151 PNMA6EA0A0J9YXQ4 647 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 SOWAHBA6NEL2 793 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 RGS20O76081 388 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 TNNI3KQ59H18 835 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 BMP8AQ7Z5Y6 402 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 CPXCR1Q8N123 301 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 ZNF512BQ96KM6 892 aaPredicted RBP11.05□□□□□ -0.64
NUP54-211ENST00000512151 C17orf80Q9BSJ5 609 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 AP5M1Q9H0R1 490 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 SH2D4AQ9H788 454 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 RAVER2Q9HCJ3 691 aaKnown RBP11.05□□□□□ -0.64
NUP54-211ENST00000512151 TLR7Q9NYK1 1049 aaKnown RBP11.05□□□□□ -0.64
NUP54-211ENST00000512151 PRKAG3Q9UGI9 489 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 FPGT-TNNI3KV9GXZ4 949 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 MYH8P13535 1937 aa11.05□□□□□ -0.64
NUP54-211ENST00000512151 TMEM221A6NGB7 291 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 M0R296 226 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 IGSF3O75054 1194 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 BAIAP3O94812 1187 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 SUPT20HL2P0C7V6 817 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 G3BP1Q13283 466 aaKnown RBP eCLIP11.04□□□□□ -0.64
NUP54-211ENST00000512151 COL19A1Q14993 1142 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 CCDC158Q5M9N0 1113 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 TAPT1Q6NXT6 567 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 ASCL5Q7RTU5 278 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 CERS3Q8IU89 383 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 RNF135Q8IUD6 432 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 ANKRD35Q8N283 1001 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 FAM133AQ8N9E0 248 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 EDAQ92838 391 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 SLF1Q9BQI6 1058 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 ZBED2Q9BTP6 218 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 CACNA1GO43497 2377 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 COL4A6Q14031 1691 aa11.04□□□□□ -0.64
NUP54-211ENST00000512151 TRIP12Q14669 1992 aaPredicted RBP11.04□□□□□ -0.64
NUP54-211ENST00000512151 CYP2D7A0A087X1C5 515 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 ATP2A1O14983 1001 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 RAD21O60216 631 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 ZEB2O60315 1214 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 KRT37O76014 449 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 LTBRP36941 435 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 KCNJ6P48051 423 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 VCPP55072 806 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 TCEAL5Q5H9L2 206 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 SDR42E1Q8WUS8 393 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 PBXIP1Q96AQ6 731 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 MRPL38Q96DV4 380 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 UPF3BQ9BZI7 483 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 DCP1AQ9NPI6 582 aaPredicted RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 DBNLQ9UJU6 430 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 SCN10AQ9Y5Y9 1956 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 MAGEB6P1A0A0J9YX57 407 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 GJB5O95377 273 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 PURAQ00577 322 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 CLUL1Q15846 466 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 NBPF20Q3BBV1 942 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 FAM117BQ6P1L5 589 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 TRIM67Q6ZTA4 783 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 EP400NLQ6ZTU2 488 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 EEPD1Q7L9B9 569 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 ERMP1Q7Z2K6 904 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 FBXO16Q8IX29 292 aaPredicted RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 RETREG2Q8NC44 543 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 FBXO22Q8NEZ5 403 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 PABPC5Q96DU9 382 aaKnown RBP11.03□□□□□ -0.64
NUP54-211ENST00000512151 RAD9AQ99638 391 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
NUP54-211ENST00000512151 GOPCQ9HD26 462 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 GPR108Q9NPR9 543 aa11.03□□□□□ -0.64
NUP54-211ENST00000512151 SMC4Q9NTJ3 1288 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms