RNA–Protein interactions for RNA: ENST00000512019.1

SMAD1-211, Transcript of SMAD family member 1, humanhuman

TSL 2

Gene SMAD1, Length 847 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD1-211ENST00000512019 CACNB2Q08289 660 aaPredicted RBP22.69■■□□□ 1.22
SMAD1-211ENST00000512019 MORN1Q5T089 497 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 LBX2Q6XYB7 198 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 PLEKHH3Q7Z736 793 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 C7orf61Q8IZ16 206 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 OGDHLQ9ULD0 1010 aa22.69■■□□□ 1.22
SMAD1-211ENST00000512019 CPLX1O14810 134 aa22.68■■□□□ 1.22
SMAD1-211ENST00000512019 PLEKHA8P1O95397 391 aa22.68■■□□□ 1.22
SMAD1-211ENST00000512019 CD2BP2O95400 341 aaKnown RBP22.68■■□□□ 1.22
SMAD1-211ENST00000512019 XRCC5P13010 732 aaKnown RBP22.68■■□□□ 1.22
SMAD1-211ENST00000512019 CPLX2Q6PUV4 134 aaKnown RBP22.68■■□□□ 1.22
SMAD1-211ENST00000512019 CCAR1Q8IX12 1150 aaKnown RBP22.68■■□□□ 1.22
SMAD1-211ENST00000512019 MB21D1Q8N884 522 aa22.68■■□□□ 1.22
SMAD1-211ENST00000512019 GTF3C6Q969F1 213 aa22.68■■□□□ 1.22
SMAD1-211ENST00000512019 SPZ1Q9BXG8 430 aa22.68■■□□□ 1.22
SMAD1-211ENST00000512019 PRR12Q9ULL5 1215 aa22.68■■□□□ 1.22
SMAD1-211ENST00000512019 ZMYND8Q9ULU4 1186 aaPredicted RBP22.68■■□□□ 1.22
SMAD1-211ENST00000512019 CTDP1Q9Y5B0 961 aaPredicted RBP22.68■■□□□ 1.22
SMAD1-211ENST00000512019 LARGE1O95461 756 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 CDC27P30260 824 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 CCND3P30281 292 aaPredicted RBP22.67■■□□□ 1.22
SMAD1-211ENST00000512019 RGS2P41220 211 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 SCRN1Q12765 414 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 SNX21Q969T3 373 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 ATG4CQ96DT6 458 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 UBA5Q9GZZ9 404 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 NCOA5Q9HCD5 579 aaKnown RBP22.67■■□□□ 1.22
SMAD1-211ENST00000512019 FAM217BQ9NTX9 383 aaPredicted RBP22.67■■□□□ 1.22
SMAD1-211ENST00000512019 A0A0G2JMZ2 1700 aa22.67■■□□□ 1.22
SMAD1-211ENST00000512019 VWA5AO00534 786 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 SOX1O00570 391 aaPredicted RBP22.66■■□□□ 1.22
SMAD1-211ENST00000512019 ZBED4O75132 1171 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 CDKL5O76039 1030 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 ADD1P35611 737 aaKnown RBP22.66■■□□□ 1.22
SMAD1-211ENST00000512019 HSCBQ8IWL3 235 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 ADGRF4Q8IZF3 695 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 CPVLQ9H3G5 476 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 C11orf49Q9H6J7 331 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 RIOX1Q9H6W3 641 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 BTBD7Q9P203 1132 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 ADAMTS5Q9UNA0 930 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 RABGAP1Q9Y3P9 1069 aa22.66■■□□□ 1.22
SMAD1-211ENST00000512019 PFASO15067 1338 aa22.65■■□□□ 1.22
SMAD1-211ENST00000512019 SRBD1Q8N5C6 995 aaKnown RBP22.65■■□□□ 1.22
SMAD1-211ENST00000512019 TMX3Q96JJ7 454 aa22.65■■□□□ 1.22
SMAD1-211ENST00000512019 APBA2Q99767 749 aa22.65■■□□□ 1.22
SMAD1-211ENST00000512019 RANBP17Q9H2T7 1088 aaKnown RBP22.65■■□□□ 1.22
SMAD1-211ENST00000512019 SLC38A10Q9HBR0 1119 aa22.65■■□□□ 1.22
SMAD1-211ENST00000512019 CNTNAP5Q8WYK1 1306 aa22.64■■□□□ 1.22
SMAD1-211ENST00000512019 SYN1P17600 705 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 MAP2K5Q13163 448 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 TRMT44Q8IYL2 757 aaKnown RBP22.64■■□□□ 1.21
SMAD1-211ENST00000512019 NECAB1Q8N987 351 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 RRP36Q96EU6 259 aaKnown RBP22.64■■□□□ 1.21
SMAD1-211ENST00000512019 JMJD4Q9H9V9 463 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 CWC22Q9HCG8 908 aaKnown RBP22.64■■□□□ 1.21
SMAD1-211ENST00000512019 VAT1LQ9HCJ6 419 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 FLRT1Q9NZU1 646 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 SEC63Q9UGP8 760 aaKnown RBP22.64■■□□□ 1.21
SMAD1-211ENST00000512019 PNMA2Q9UL42 364 aa22.64■■□□□ 1.21
SMAD1-211ENST00000512019 CYTH3O43739 400 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 IFNAR1P17181 557 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 OAZ1P54368 228 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 CDC37Q16543 378 aaPredicted RBP22.63■■□□□ 1.21
SMAD1-211ENST00000512019 WDR78Q5VTH9 848 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 LHX8Q68G74 356 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 CMTR1Q8N1G2 835 aaKnown RBP22.63■■□□□ 1.21
SMAD1-211ENST00000512019 CCDC82Q8N4S0 544 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 LRCH3Q96II8 777 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 GDF15Q99988 308 aa22.63■■□□□ 1.21
SMAD1-211ENST00000512019 A0A1W2PPC1 479 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 K7ELQ4 463 aaPredicted RBP22.62■■□□□ 1.21
SMAD1-211ENST00000512019 FUT2Q10981 343 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 NTRK3Q16288 839 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 SLC35G1Q2M3R5 365 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 HOMER1Q86YM7 354 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 CCDC83Q8IWF9 413 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 TRIM22Q8IYM9 498 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 MTMR8Q96EF0 704 aa22.62■■□□□ 1.21
SMAD1-211ENST00000512019 COL11A1P12107 1806 aaPredicted RBP22.61■■□□□ 1.21
SMAD1-211ENST00000512019 ATP2A1O14983 1001 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 ZBTB5O15062 677 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 PTPREP23469 700 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 CCNA1P78396 465 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 AKAP17AQ02040 695 aaKnown RBP22.61■■□□□ 1.21
SMAD1-211ENST00000512019 CCDC174Q6PII3 467 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 REPS2Q8NFH8 660 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 PIGSQ96S52 555 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 TEX13BQ9BXU2 312 aa22.61■■□□□ 1.21
SMAD1-211ENST00000512019 RNF26Q9BY78 433 aaPredicted RBP22.61■■□□□ 1.21
SMAD1-211ENST00000512019 ZNFX1Q9P2E3 1918 aaKnown RBP22.61■■□□□ 1.21
SMAD1-211ENST00000512019 ZNF236Q9UL36 1845 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 PNMA6FA0A0J9YX94 578 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 COL6A1P12109 1028 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 TRAF1Q13077 416 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 TMEM132BQ14DG7 1078 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 QRICH1Q2TAL8 776 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 NPLOC4Q8TAT6 608 aa22.6■■□□□ 1.21
SMAD1-211ENST00000512019 LLPHQ9BRT6 129 aaKnown RBP22.6■■□□□ 1.21
SMAD1-211ENST00000512019 SLC26A6Q9BXS9 759 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms