RNA–Protein interactions for RNA: ENST00000511895.1

LINC01088-208, Transcript of long intergenic non-protein coding RNA 1088, humanhuman

TSL 2 BASIC

Gene LINC01088, Length 795 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01088-208ENST00000511895 SIRT2Q8IXJ6 389 aa8.63□□□□□ -1.03
LINC01088-208ENST00000511895 TMEM52Q8NDY8 209 aa8.63□□□□□ -1.03
LINC01088-208ENST00000511895 SRPK1Q96SB4 655 aaKnown RBP8.63□□□□□ -1.03
LINC01088-208ENST00000511895 RNF32Q9H0A6 362 aa8.63□□□□□ -1.03
LINC01088-208ENST00000511895 CCDC113Q9H0I3 377 aa8.63□□□□□ -1.03
LINC01088-208ENST00000511895 NKX2-4Q9H2Z4 354 aa8.63□□□□□ -1.03
LINC01088-208ENST00000511895 USP35Q9P2H5 1018 aa8.63□□□□□ -1.03
LINC01088-208ENST00000511895 EIF4G1Q04637 1599 aaKnown RBP8.63□□□□□ -1.03
LINC01088-208ENST00000511895 A0A1W2PQ45 241 aaPredicted RBP8.62□□□□□ -1.03
LINC01088-208ENST00000511895 A0A1W2PQY0 241 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 WTIPA6NIX2 430 aaPredicted RBP8.62□□□□□ -1.03
LINC01088-208ENST00000511895 NRDCO43847 1150 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 ECI1P42126 302 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 GALK1P51570 392 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 IFRD2Q12894 506 aaPredicted RBP8.62□□□□□ -1.03
LINC01088-208ENST00000511895 RASGRF1Q13972 1273 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 HSF5Q4G112 596 aaPredicted RBP8.62□□□□□ -1.03
LINC01088-208ENST00000511895 GALNT18Q6P9A2 607 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 DEPDC7Q96QD5 511 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 SP110Q9HB58 689 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 GPRC5CQ9NQ84 441 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 CYP26B1Q9NR63 512 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 PFDN2Q9UHV9 154 aa8.62□□□□□ -1.03
LINC01088-208ENST00000511895 A0A1W2PQU0 124 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 PAMP19021 973 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 PPP2R2AP63151 447 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 SNX17Q15036 470 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 SLCO6A1Q86UG4 719 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 JMJD8Q96S16 334 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 OSBPL2Q9H1P3 480 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 CLEC1BQ9P126 229 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 ERCC6Q03468 1493 aa8.61□□□□□ -1.03
LINC01088-208ENST00000511895 NPHP3-ACAD11A0A0J9YXS1 232 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 HOXC12P31275 282 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 SSRP1Q08945 709 aaKnown RBP8.6□□□□□ -1.03
LINC01088-208ENST00000511895 HSP90AA2PQ14568 343 aaPredicted RBP8.6□□□□□ -1.03
LINC01088-208ENST00000511895 SPATC1Q76KD6 591 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 LRRC47Q8N1G4 583 aaKnown RBP8.6□□□□□ -1.03
LINC01088-208ENST00000511895 NUP43Q8NFH3 380 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 SGSM3Q96HU1 749 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 PLCD4Q9BRC7 762 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 SNTG2Q9NY99 539 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 IMPACTQ9P2X3 320 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 CARMIL2Q6F5E8 1435 aa8.6□□□□□ -1.03
LINC01088-208ENST00000511895 TRBV23OR9-2A0A075B6M9 112 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 FAM221BA6H8Z2 402 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 NOTOA8MTQ0 251 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 THBDP07204 575 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 PLS3P13797 630 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 PRKCAP17252 672 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 RASA3Q14644 834 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 BMS1Q14692 1282 aaKnown RBP8.59□□□□□ -1.03
LINC01088-208ENST00000511895 SF1Q15637 639 aaKnown RBP8.59□□□□□ -1.03
LINC01088-208ENST00000511895 CPNE8Q86YQ8 564 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 COPS5Q92905 334 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 LIN37Q96GY3 246 aaPredicted RBP8.59□□□□□ -1.03
LINC01088-208ENST00000511895 CCDC140Q96MF4 163 aa8.59□□□□□ -1.03
LINC01088-208ENST00000511895 SHROOM4Q9ULL8 1493 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 A0A1W2PQJ5 194 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 PAX4O43316 350 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 L1CAMP32004 1257 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 GRIA2P42262 883 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 CEBPAP49715 358 aaPredicted RBP8.58□□□□□ -1.04
LINC01088-208ENST00000511895 KIR3DS1Q14943 382 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 LRP10Q7Z4F1 713 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 NLRX1Q86UT6 975 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 MKL1Q969V6 931 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 ZNF669Q96BR6 464 aaPredicted RBP8.58□□□□□ -1.04
LINC01088-208ENST00000511895 AARSD1Q9BTE6 412 aaKnown RBP8.58□□□□□ -1.04
LINC01088-208ENST00000511895 IER2Q9BTL4 223 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 SPATA9Q9BWV2 254 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 ZSWIM4Q9H7M6 989 aa8.58□□□□□ -1.04
LINC01088-208ENST00000511895 ZNF503-AS2A6NEH8 195 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 CPP00450 1065 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 PDE6BP35913 854 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 CYP4F8P98187 520 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 PRSS53Q2L4Q9 553 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 LNPKQ9C0E8 428 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 SLC6A17Q9H1V8 727 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 YBX2Q9Y2T7 364 aaKnown RBP8.57□□□□□ -1.04
LINC01088-208ENST00000511895 RNF114Q9Y508 228 aa8.57□□□□□ -1.04
LINC01088-208ENST00000511895 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.57□□□□□ -1.04
LINC01088-208ENST00000511895 TRAV20A0A0B4J274 112 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 PRODHO43272 600 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 EFEMP2O95967 443 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 ARL4AP40617 200 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 GFRA1P56159 465 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 NFE2L2Q16236 605 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 MLANAQ16655 118 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 ADGRF1Q5T601 910 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 FRS2Q8WU20 508 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 KCTD13Q8WZ19 329 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 SHISA4Q96DD7 197 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 INTS4Q96HW7 963 aaKnown RBP8.56□□□□□ -1.04
LINC01088-208ENST00000511895 DIRC2Q96SL1 478 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 CRTAC1Q9NQ79 661 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 ARHGEF4Q9NR80 690 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 FAM53CQ9NYF3 392 aa8.56□□□□□ -1.04
LINC01088-208ENST00000511895 KDM2BQ8NHM5 1336 aa8.55□□□□□ -1.04
LINC01088-208ENST00000511895 LRRC10BA6NIK2 292 aa8.55□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms