RNA–Protein interactions for RNA: ENST00000511633.5

NEK1-207, Transcript of NIMA related kinase 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene NEK1, Length 5,536 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK1-207ENST00000511633 TNNC2P02585 160 aa9.98□□□□□ -0.81
NEK1-207ENST00000511633 YWHAEP62258 255 aaKnown RBP9.98□□□□□ -0.81
NEK1-207ENST00000511633 AFF2P51816 1311 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 BMP3P12645 472 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 USP14P54578 494 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 POLR2FP61218 127 aaKnown RBP9.97□□□□□ -0.81
NEK1-207ENST00000511633 CACNB1Q02641 598 aaPredicted RBP9.97□□□□□ -0.81
NEK1-207ENST00000511633 TUBB2AQ13885 445 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 ELF2Q15723 593 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 SLFNL1Q499Z3 407 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 ODR4Q5SWX8 454 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 FAM160B1Q5W0V3 765 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 GBP6Q6ZN66 633 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 TBCKQ8TEA7 893 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 TUBB2BQ9BVA1 445 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 TRIM7Q9C029 511 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 FTOQ9C0B1 505 aaKnown RBP eCLIP9.97□□□□□ -0.81
NEK1-207ENST00000511633 NRBP2Q9NSY0 501 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 LARSQ9P2J5 1176 aaKnown RBP9.97□□□□□ -0.81
NEK1-207ENST00000511633 ALKQ9UM73 1620 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 IGKV5-2P06315 115 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 PSMC4P43686 418 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 NR5A1Q13285 461 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 GOLGA5Q8TBA6 731 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 GNL3Q9BVP2 549 aaKnown RBP eCLIP9.97□□□□□ -0.81
NEK1-207ENST00000511633 C1orf112Q9NSG2 853 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 SAMD15Q9P1V8 674 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 ODF2LQ9ULJ1 636 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 STAT2P52630 851 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 SNAP25P60880 206 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 MKRN3Q13064 507 aaKnown RBP9.97□□□□□ -0.81
NEK1-207ENST00000511633 SLC39A14Q15043 492 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 OR8K1Q8NGG5 319 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 PI4K2BQ8TCG2 481 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 ADPGKQ9BRR6 497 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 PNMA2Q9UL42 364 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 SNAP23O00161 211 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 SUPT20HL1Q3ZLR7 823 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 CFAP221Q4G0U5 840 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 TRIML1Q8N9V2 468 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 IPO4Q8TEX9 1081 aaKnown RBP9.97□□□□□ -0.81
NEK1-207ENST00000511633 MASTLQ96GX5 879 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 DHX36Q9H2U1 1008 aaKnown RBP9.97□□□□□ -0.81
NEK1-207ENST00000511633 PI4KBQ9UBF8 816 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 NCAPD2Q15021 1401 aa9.97□□□□□ -0.81
NEK1-207ENST00000511633 CACNB3P54284 484 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 GABPAQ06546 454 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 PPM1KQ8N3J5 372 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 ARHGAP31Q2M1Z3 1444 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 BUB1O43683 1085 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 VIMP08670 466 aaKnown RBP9.96□□□□□ -0.81
NEK1-207ENST00000511633 UBE2SQ16763 222 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 GEN1Q17RS7 908 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 LONRF2Q1L5Z9 754 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 SYDE2Q5VT97 1194 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 CLEC4GQ6UXB4 293 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 TTLL6Q8N841 843 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 SH3RF3Q8TEJ3 882 aaPredicted RBP9.96□□□□□ -0.81
NEK1-207ENST00000511633 POMGNT1Q8WZA1 660 aa9.96□□□□□ -0.81
NEK1-207ENST00000511633 LARP4BQ92615 738 aaKnown RBP9.96□□□□□ -0.81
NEK1-207ENST00000511633 MMP1P03956 469 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 OSBPP22059 807 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 ATP5DP30049 168 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CDK8P49336 464 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 SPATA1Q5VX52 437 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 TBC1D9BQ66K14 1250 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 IQCDQ96DY2 449 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CCDC51Q96ER9 411 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 PKNOX2Q96KN3 472 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 APOL6Q9BWW8 343 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 COA1Q9GZY4 146 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 COL15A1P39059 1388 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 PALM3A6NDB9 673 aaPredicted RBP9.96□□□□□ -0.82
NEK1-207ENST00000511633 MEIS1O00470 390 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 LARGE1O95461 756 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 ALDH3A1P30838 453 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 KIF23Q02241 960 aaPredicted RBP9.96□□□□□ -0.82
NEK1-207ENST00000511633 IFRD2Q12894 506 aaPredicted RBP9.96□□□□□ -0.82
NEK1-207ENST00000511633 MAP7D1Q3KQU3 841 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CASC4Q6P4E1 433 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 SMYD4Q8IYR2 804 aaPredicted RBP9.96□□□□□ -0.82
NEK1-207ENST00000511633 GRAMD1CQ8IYS0 662 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 RIOK1Q9BRS2 568 aaKnown RBP9.96□□□□□ -0.82
NEK1-207ENST00000511633 TSKSQ9UJT2 592 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 AMFRQ9UKV5 643 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 H0YCG3 227 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 PPP6R2O75170 966 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 TMEM191BP0C7N4 346 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 TMOD1P28289 359 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 ITIH3Q06033 890 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 LRRC41Q15345 812 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CIAPIN1Q6FI81 312 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 SCYL2Q6P3W7 929 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CEP128Q6ZU80 1094 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CCDC125Q86Z20 511 aa9.96□□□□□ -0.82
NEK1-207ENST00000511633 CPSF1Q10570 1443 aaKnown RBP9.95□□□□□ -0.82
NEK1-207ENST00000511633 PTCH1Q13635 1447 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 TRPM1Q7Z4N2 1603 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 LAD1O00515 517 aa9.95□□□□□ -0.82
NEK1-207ENST00000511633 EBAG9O00559 213 aa9.95□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms