RNA–Protein interactions for RNA: ENST00000511467.1

PTPN13-209, Transcript of protein tyrosine phosphatase, non-receptor type 13, humanhuman

APPRIS P4 TSL 2 BASIC

Gene PTPN13, Length 8,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN13-209ENST00000511467 ZC3H6P61129 1189 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 RPS8P62241 208 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TNFAIP2Q03169 654 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 INF2Q27J81 1249 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NUTM1Q86Y26 1132 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TRMT2AQ8IZ69 625 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 XPO5Q9HAV4 1204 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 MRPL47Q9HD33 250 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 USP42Q9H9J4 1324 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 IKBKBO14920 756 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TCP1P17987 556 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TSGA10IPQ3SY00 556 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 ZNF569Q5MCW4 686 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 PRPF40BQ6NWY9 871 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 ANKRD23Q86SG2 305 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 RNF10Q8N5U6 811 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TSR2Q969E8 191 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 CNPY3Q9BT09 278 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 PHACTR1Q9C0D0 580 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 STRIP2Q9ULQ0 834 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 EXOC6BQ9Y2D4 811 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TNKSO95271 1327 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NDUFAB1O14561 156 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 BCAR3O75815 825 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 PDE6CP51160 858 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 CCR3P51677 355 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NAA20P61599 178 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 FNBP4Q8N3X1 1017 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TRAF3IP1Q8TDR0 691 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 MCCC1Q96RQ3 725 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 MTIF3Q9H2K0 278 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 SIPA1L3O60292 1781 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 ARHGEF35A5YM69 484 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 SNUPNO95149 360 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 XRCC5P13010 732 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 CHMLP26374 656 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 FKBP1AP62942 108 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NONOQ15233 471 aaKnown RBP eCLIP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 MAP7D1Q3KQU3 841 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 RAB11FIP4Q86YS3 637 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 USP13Q92995 863 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 GTF3C6Q969F1 213 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 BRIP1Q9BX63 1249 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 C2orf40Q9H1Z8 148 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NDE1Q9NXR1 346 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 PCDHB8Q9UN66 801 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 KLF18A0A0U1RQI7 1052 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 NEURL1BA8MQ27 555 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 STILQ15468 1287 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 TDRD12Q587J7 1177 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 FASTKD5Q7L8L6 764 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 CKAP2LQ8IYA6 745 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 PPP1R14CQ8TAE6 165 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 MCM9Q9NXL9 1143 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 PI4KBQ9UBF8 816 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 RP1L1Q8IWN7 2480 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 KPNA6O60684 536 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 BARGINQ6ZT62 677 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 DGKHQ86XP1 1220 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 ZHX3Q9H4I2 956 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 Q9H521 79 aa5.43□□□□□ -1.54
PTPN13-209ENST00000511467 CNOT10Q9H9A5 744 aaKnown RBP5.43□□□□□ -1.54
PTPN13-209ENST00000511467 SIGLEC1Q9BZZ2 1709 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 RSPH10B2B2RC85 870 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 RSPH10BP0C881 870 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 LMAN1P49257 510 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 PAK2Q13177 524 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 RINT1Q6NUQ1 792 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 ARHGEF25Q86VW2 580 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 DHX38Q92620 1227 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 SLC26A6Q9BXS9 759 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 FRMD8P1Q9BZ68 369 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 NRBP2Q9NSY0 501 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 NKIRAS1Q9NYS0 192 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 DPP7Q9UHL4 492 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 DICER1Q9UPY3 1922 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 SEC16AO15027 2179 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 SSBP05455 408 aaKnown RBP eCLIP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 TBXAS1P24557 533 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 HADHQ16836 314 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 AMNQ9BXJ7 453 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 VCX3AQ9NNX9 186 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 PLEKHM2Q8IWE5 1019 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 SH3TC2Q8TF17 1288 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 CCDC124Q96CT7 223 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 NACC1Q96RE7 527 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 RPS6KC1Q96S38 1066 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 ZHX2Q9Y6X8 837 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 TDRD15B5MCY1 1934 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 NUTM2BA6NNL0 878 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 NUTM2EB1AL46 878 aaPredicted RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 YARSP54577 528 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 ITIH3Q06033 890 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 CDK5RAP1Q96SZ6 601 aaKnown RBP5.42□□□□□ -1.54
PTPN13-209ENST00000511467 DRC3Q9H069 523 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 PALLDQ8WX93 1383 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 SYNRGQ9UMZ2 1314 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 ASIC1P78348 528 aa5.42□□□□□ -1.54
PTPN13-209ENST00000511467 ARHGAP4P98171 946 aa5.42□□□□□ -1.54
Retrieved 100 of 20,778 RNA–protein pairs in 215 ms