RNA–Protein interactions for RNA: ENST00000511439.5

TOPBP1-208, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 5

Gene TOPBP1, Length 1,142 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-208ENST00000511439 MCOLN1Q9GZU1 580 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 ZNF552Q9H707 407 aaPredicted RBP5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 EHMT1Q9H9B1 1298 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 GINM1Q9NU53 330 aa5.59□□□□□ -1.51
TOPBP1-208ENST00000511439 LRP6O75581 1613 aa5.59□□□□□ -1.52
TOPBP1-208ENST00000511439 SPATA31A6Q5VVP1 1343 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 OR14I1A6ND48 311 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 RAG1P15918 1043 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 ATF4P18848 351 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 MCM4P33991 863 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 CLCQ05315 142 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 TIGD5Q53EQ6 642 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 ZNF655Q8N720 491 aaPredicted RBP5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 SEC16BQ96JE7 1060 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 KIF2CQ99661 725 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 EFR3BQ9Y2G0 817 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 ZNF281Q9Y2X9 895 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 PCDHB14Q9Y5E9 798 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 ATP10BO94823 1461 aa5.58□□□□□ -1.52
TOPBP1-208ENST00000511439 ROBO1Q9Y6N7 1651 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 SSU72P8A0A1W2PR75 194 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 SHISA3A0PJX4 238 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 HRKO00198 91 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 RFXAPO00287 272 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 ENDOUP21128 410 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 RPL10P27635 214 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 KIR2DL1P43626 348 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 KIR2DL2P43627 348 aaPredicted RBP5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 PCBP3P57721 371 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 ZNF385BQ569K4 471 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 GK5Q6ZS86 529 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 VPS37DQ86XT2 251 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 TMEM151BQ8IW70 566 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 VWCEQ96DN2 955 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 GMLQ99445 158 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 GMIPQ9P107 970 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 ZMYM5Q9UJ78 669 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 CNOT6Q9ULM6 557 aaKnown RBP5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 A2ML1A8K2U0 1454 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 GOLGA3Q08378 1498 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 LRRC9Q6ZRR7 1453 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 SCAPERQ9BY12 1400 aa5.57□□□□□ -1.52
TOPBP1-208ENST00000511439 NWD1Q149M9 1564 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 MYOCOSA0A1B0GUC4 107 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 SLC22A31A6NKX4 558 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 RBAK-RBAKDNI3L0D1 243 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 PSPNO60542 156 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 INHBBP09529 407 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 CCNFP41002 786 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 NASPP49321 788 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 SLC14A2Q15849 920 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 OLFML2BQ68BL8 750 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 HDAC8Q9BY41 377 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 IRF2BPLQ9H1B7 796 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 CRTAC1Q9NQ79 661 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 ZNRF3Q9ULT6 936 aa5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 NPHP4O75161 1426 aaPredicted RBP5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 DNMT1P26358 1616 aaKnown RBP5.56□□□□□ -1.52
TOPBP1-208ENST00000511439 CARMIL1Q5VZK9 1371 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 DIP2CQ9Y2E4 1556 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 PRRG2O14669 202 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 NRDCO43847 1150 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 DNAJA2O60884 412 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 RBM6P78332 1123 aaKnown RBP5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 ARID5AQ03989 594 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 ARSHQ5FYA8 562 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 WAPLQ7Z5K2 1190 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 NLRX1Q86UT6 975 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 FAM9AQ8IZU1 332 aaPredicted RBP5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 USHBP1Q8N6Y0 703 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 LINC00116Q8NCU8 138 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 SHISA4Q96DD7 197 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 TCTN2Q96GX1 697 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 MAP6Q96JE9 813 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 FERD3LQ96RJ6 166 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 G6PC3Q9BUM1 346 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 TCFL5Q9UL49 500 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 PPT2Q9UMR5 302 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 ZNF518AQ6AHZ1 1483 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 FGD6Q6ZV73 1430 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 KIF27Q86VH2 1401 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 ZMYM3Q14202 1370 aa5.55□□□□□ -1.52
TOPBP1-208ENST00000511439 PHLPP1O60346 1717 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 NCANO14594 1321 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 MED14O60244 1454 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 KRTAP9-7A8MTY7 169 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 B8ZZF3 427 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 ABLIM1O14639 778 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 UBOX5O94941 541 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 FGRP09769 529 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 IMPDH2P12268 514 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 DNAJA1P31689 397 aaKnown RBP5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 CTSWP56202 376 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 NBPF9Q3BBW0 867 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 ADGRF1Q5T601 910 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 NBPF12Q5TAG4 269 aaPredicted RBP5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 TCERG1LQ5VWI1 586 aa5.54□□□□□ -1.52
TOPBP1-208ENST00000511439 CDCP2Q5VXM1 449 aa5.54□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 105.2 ms