RNA–Protein interactions for RNA: ENST00000510877.5

LIN54-210, Transcript of lin-54 DREAM MuvB core complex component, humanhuman

TSL 1 (best)

Gene LIN54, Length 4,507 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIN54-210ENST00000510877 CCDC39Q9UFE4 941 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 SMCO2A6NFE2 343 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 CEBPZQ03701 1054 aaKnown RBP14.13□□□□□ -0.15
LIN54-210ENST00000510877 KAZALD1Q96I82 304 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 ABCB11O95342 1321 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 PDS5AQ29RF7 1337 aaKnown RBP14.13□□□□□ -0.15
LIN54-210ENST00000510877 CCDC173Q0VFZ6 552 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 CST9Q5W186 159 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 ZNF396Q96N95 335 aaPredicted RBP14.13□□□□□ -0.15
LIN54-210ENST00000510877 DDX4Q9NQI0 724 aaKnown RBP14.13□□□□□ -0.15
LIN54-210ENST00000510877 CCL5P13501 91 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 UBA7P41226 1012 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 KCNV1Q6PIU1 500 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 PLA2G4DQ86XP0 818 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 MTMR4Q9NYA4 1195 aa14.13□□□□□ -0.15
LIN54-210ENST00000510877 ESPNB1AK53 854 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 KIAA1841Q6NSI8 718 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 GIMAP8Q8ND71 665 aaPredicted RBP14.12□□□□□ -0.15
LIN54-210ENST00000510877 TMEM47Q9BQJ4 181 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 NHSQ6T4R5 1651 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 GPR142Q7Z601 462 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 LARP6Q9BRS8 491 aaKnown RBP14.12□□□□□ -0.15
LIN54-210ENST00000510877 AKT3Q9Y243 479 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 hCG_1642624A0A1W2PR95 340 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 OTOP1Q7RTM1 612 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 GAS2L1Q99501 681 aaPredicted RBP14.12□□□□□ -0.15
LIN54-210ENST00000510877 WDR18Q9BV38 432 aa14.12□□□□□ -0.15
LIN54-210ENST00000510877 GJB1P08034 283 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 GRIK5Q16478 980 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 RPUSD2Q8IZ73 545 aaKnown RBP14.11□□□□□ -0.15
LIN54-210ENST00000510877 SPATA33Q96N06 139 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 PEAK1Q9H792 1746 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 GH1P01241 217 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 HSPA8P11142 646 aaKnown RBP14.11□□□□□ -0.15
LIN54-210ENST00000510877 TPM4P67936 248 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 APOBRQ0VD83 1088 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 C16orf86Q6ZW13 317 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 CCDC83Q8IWF9 413 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 SHCBP1Q8NEM2 672 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 TBC1D12O60347 775 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 TBCAO75347 108 aaKnown RBP14.11□□□□□ -0.15
LIN54-210ENST00000510877 MIER3Q7Z3K6 550 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 TMEM199Q8N511 208 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 UIMC1Q96RL1 719 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 JPH2Q9BR39 696 aaPredicted RBP14.11□□□□□ -0.15
LIN54-210ENST00000510877 XRN2Q9H0D6 950 aaKnown RBP eCLIP14.11□□□□□ -0.15
LIN54-210ENST00000510877 PPP1R9AQ9ULJ8 1098 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 SNCAIPQ9Y6H5 919 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 LRP10Q7Z4F1 713 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 ABHD16BQ9H3Z7 469 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 TMX2Q9Y320 296 aa14.11□□□□□ -0.15
LIN54-210ENST00000510877 UPP2O95045 317 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 DSG3P32926 999 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 OTUD6AQ7L8S5 288 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 IFT74Q96LB3 600 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 E7EWF7 191 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 HOXA13P31271 388 aaPredicted RBP14.1□□□□□ -0.15
LIN54-210ENST00000510877 GSG1L2A8MUP6 293 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 MARK3P27448 753 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 STXBP4Q6ZWJ1 553 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 GMLQ99445 158 aa14.1□□□□□ -0.15
LIN54-210ENST00000510877 DDAH1O94760 285 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 CCDC73Q6ZRK6 1079 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 PIGSQ96S52 555 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 ZCCHC17Q9NP64 241 aaKnown RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 ARGLU1Q9NWB6 273 aaPredicted RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 SBK1Q52WX2 424 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 SYCP3Q8IZU3 236 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 U2AF1L4Q8WU68 220 aaKnown RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 HPS5Q9UPZ3 1129 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 GAKO14976 1311 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 RPTORQ8N122 1335 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 MARF1Q9Y4F3 1742 aaKnown RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 TPM3P06753 285 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 NASPP49321 788 aaPredicted RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 NONOQ15233 471 aaKnown RBP eCLIP14.09□□□□□ -0.15
LIN54-210ENST00000510877 MOV10L1Q9BXT6 1211 aaKnown RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 SH2B1Q9NRF2 756 aaPredicted RBP14.09□□□□□ -0.15
LIN54-210ENST00000510877 SLFNL1Q499Z3 407 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 PRR16Q569H4 304 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 KRT79Q5XKE5 535 aa14.09□□□□□ -0.15
LIN54-210ENST00000510877 BRWD3Q6RI45 1802 aa14.08□□□□□ -0.15
LIN54-210ENST00000510877 DENND3A2RUS2 1198 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 IDEP14735 1019 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 RBM25P49756 843 aaKnown RBP14.08□□□□□ -0.16
LIN54-210ENST00000510877 PDXDC2PQ6P474 469 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 ERLIN2O94905 339 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 GJC2Q5T442 439 aaPredicted RBP14.08□□□□□ -0.16
LIN54-210ENST00000510877 MIS18BP1Q6P0N0 1132 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 FANCBQ8NB91 859 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 PUF60Q9UHX1 559 aaKnown RBP14.08□□□□□ -0.16
LIN54-210ENST00000510877 DEFB128Q7Z7B8 93 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 C11orf49Q9H6J7 331 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 SLC28A3Q9HAS3 691 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 PRR12Q9ULL5 1215 aa14.08□□□□□ -0.16
LIN54-210ENST00000510877 KRT25Q7Z3Z0 450 aa14.07□□□□□ -0.16
LIN54-210ENST00000510877 MYOCDQ8IZQ8 938 aa14.07□□□□□ -0.16
LIN54-210ENST00000510877 ATP6V0A1Q93050 837 aa14.07□□□□□ -0.16
LIN54-210ENST00000510877 FAM212AQ96EL1 285 aa14.07□□□□□ -0.16
LIN54-210ENST00000510877 PAWRQ96IZ0 340 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms