RNA–Protein interactions for RNA: ENST00000510541.5

CLDND1-221, Transcript of claudin domain containing 1, humanhuman

TSL 4

Gene CLDND1, Length 573 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLDND1-221ENST00000510541 CDC37Q16543 378 aaPredicted RBP20.08■□□□□ 0.81
CLDND1-221ENST00000510541 CCL14Q16627 93 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 APOA5Q6Q788 366 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 ANKRD35Q8N283 1001 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 CLEC4DQ8WXI8 215 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 UBA5Q9GZZ9 404 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 XRN2Q9H0D6 950 aaKnown RBP eCLIP20.08■□□□□ 0.81
CLDND1-221ENST00000510541 ALDH8A1Q9H2A2 487 aaPredicted RBP20.08■□□□□ 0.81
CLDND1-221ENST00000510541 RBM28Q9NW13 759 aaKnown RBP20.08■□□□□ 0.81
CLDND1-221ENST00000510541 CYP39A1Q9NYL5 469 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 MTMR7Q9Y216 660 aa20.08■□□□□ 0.81
CLDND1-221ENST00000510541 ALAS1P13196 640 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 RPS6KB1P23443 525 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 COL9A3Q14050 684 aaPredicted RBP20.07■□□□□ 0.8
CLDND1-221ENST00000510541 SYNE3Q6ZMZ3 975 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 UBE2Q1Q7Z7E8 422 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 MCF2L2Q86YR7 1114 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 FANCBQ8NB91 859 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 DNERQ8NFT8 737 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 AMNQ9BXJ7 453 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 UNC93B1Q9H1C4 597 aa20.07■□□□□ 0.8
CLDND1-221ENST00000510541 MRPL11Q9Y3B7 192 aaKnown RBP20.07■□□□□ 0.8
CLDND1-221ENST00000510541 PNMA6FA0A0J9YX94 578 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 SMCHD1A6NHR9 2005 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 ASB14A6NK59 587 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 CYTH3O43739 400 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 ECM2O94769 699 aaPredicted RBP20.06■□□□□ 0.8
CLDND1-221ENST00000510541 QRICH1Q2TAL8 776 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 CCDC174Q6PII3 467 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 RUFY3Q7L099 469 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 FBXO11Q86XK2 927 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 U2AF1L4Q8WU68 220 aaKnown RBP20.06■□□□□ 0.8
CLDND1-221ENST00000510541 FGD4Q96M96 766 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 JAKMIP1Q96N16 626 aaKnown RBP20.06■□□□□ 0.8
CLDND1-221ENST00000510541 OGDHLQ9ULD0 1010 aa20.06■□□□□ 0.8
CLDND1-221ENST00000510541 POTEFA5A3E0 1075 aa20.05■□□□□ 0.8
CLDND1-221ENST00000510541 SLC35G1Q2M3R5 365 aa20.05■□□□□ 0.8
CLDND1-221ENST00000510541 MUM1L1Q5H9M0 696 aa20.05■□□□□ 0.8
CLDND1-221ENST00000510541 NFXL1Q6ZNB6 911 aa20.05■□□□□ 0.8
CLDND1-221ENST00000510541 ADD3Q9UEY8 706 aaKnown RBP20.05■□□□□ 0.8
CLDND1-221ENST00000510541 CCDC196A0A1B0GTZ2 297 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 POTEB2H3BUK9 544 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 SEPT4O43236 478 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 PGK2P07205 417 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 LHX8Q68G74 356 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 ABHD16BQ9H3Z7 469 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 GPHNQ9NQX3 736 aaPredicted RBP20.04■□□□□ 0.8
CLDND1-221ENST00000510541 MYH6P13533 1939 aa20.04■□□□□ 0.8
CLDND1-221ENST00000510541 B4DLN1 442 aa20.03■□□□□ 0.8
CLDND1-221ENST00000510541 CASTP20810 708 aaKnown RBP20.03■□□□□ 0.8
CLDND1-221ENST00000510541 MRPL12P52815 198 aaKnown RBP20.03■□□□□ 0.8
CLDND1-221ENST00000510541 NKX3-2P78367 333 aa20.03■□□□□ 0.8
CLDND1-221ENST00000510541 TRIM32Q13049 653 aa20.03■□□□□ 0.8
CLDND1-221ENST00000510541 TMTC3Q6ZXV5 915 aa20.03■□□□□ 0.8
CLDND1-221ENST00000510541 SHISA4Q96DD7 197 aa20.03■□□□□ 0.8
CLDND1-221ENST00000510541 CYP46A1Q9Y6A2 500 aa20.03■□□□□ 0.8
CLDND1-221ENST00000510541 NFIBO00712 420 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 ZBTB43O43298 467 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 EDNRBP24530 442 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 CYP2C19P33261 490 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 HSD17B4P51659 736 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 RNF207Q6ZRF8 634 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 HOMER2Q9NSB8 354 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 RBM27Q9P2N5 1060 aaKnown RBP20.02■□□□□ 0.8
CLDND1-221ENST00000510541 DDX20Q9UHI6 824 aaKnown RBP20.02■□□□□ 0.8
CLDND1-221ENST00000510541 CNPY2Q9Y2B0 182 aa20.02■□□□□ 0.8
CLDND1-221ENST00000510541 hCG_1984214I3L0E3 225 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 SNAI1O95863 264 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 ZNF865P0CJ78 1059 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 SOX10P56693 466 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 SNAP25P60880 206 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 RPS6P62753 249 aaKnown RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 FUT2Q10981 343 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 C8orf34Q49A92 452 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 SRBD1Q8N5C6 995 aaKnown RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 ZNF713Q8N859 430 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 NUP133Q8WUM0 1156 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 RRP36Q96EU6 259 aaKnown RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 ZNF274Q96GC6 653 aaPredicted RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 DEFB118Q96PH6 123 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 MPHOSPH6Q99547 160 aaKnown RBP20.01■□□□□ 0.79
CLDND1-221ENST00000510541 KATNBL1Q9H079 304 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 CPVLQ9H3G5 476 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 BRPF3Q9ULD4 1205 aa20.01■□□□□ 0.79
CLDND1-221ENST00000510541 SOWAHBA6NEL2 793 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 EN2P19622 333 aaPredicted RBP20■□□□□ 0.79
CLDND1-221ENST00000510541 BAATQ14032 418 aaPredicted RBP20■□□□□ 0.79
CLDND1-221ENST00000510541 Q6ZUG5 572 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 TRPV1Q8NER1 839 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 CHMP4CQ96CF2 233 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 IWS1Q96ST2 819 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 LRRC2Q9BYS8 371 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 PCDHA1Q9Y5I3 950 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 LCTP09848 1927 aa20■□□□□ 0.79
CLDND1-221ENST00000510541 PIK3CDO00329 1044 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 OPLAHO14841 1288 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 DHX16O60231 1041 aaKnown RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 PPP1R11O60927 126 aaPredicted RBP19.99■□□□□ 0.79
CLDND1-221ENST00000510541 AKR1A1P14550 325 aa19.99■□□□□ 0.79
CLDND1-221ENST00000510541 CCND3P30281 292 aaPredicted RBP19.99■□□□□ 0.79
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms