RNA–Protein interactions for RNA: ENST00000510472.1

HMGXB3-203, Transcript of HMG-box containing 3, humanhuman

TSL 2

Gene HMGXB3, Length 580 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGXB3-203ENST00000510472 SOWAHBA6NEL2 793 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 NFIBO00712 420 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 DDAH1O94760 285 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 TFRCP02786 760 aaKnown RBP13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 ZNF865P0CJ78 1059 aaPredicted RBP13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 CDC37Q16543 378 aaPredicted RBP13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 CATIPQ7Z7H3 387 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 RGS22Q8NE09 1264 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 MAF1Q9H063 256 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 DDX20Q9UHI6 824 aaKnown RBP13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 SNX14Q9Y5W7 946 aa13.7□□□□□ -0.22
HMGXB3-203ENST00000510472 PFASO15067 1338 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 RBBP6Q7Z6E9 1792 aaKnown RBP13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 POTEB2H3BUK9 544 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 SEPT4O43236 478 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 PPP1R11O60927 126 aaPredicted RBP13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 HMGB1P09429 215 aaKnown RBP13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 SMARCA1P28370 1054 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 BAATQ14032 418 aaPredicted RBP13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 QRICH1Q2TAL8 776 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 ZNF654Q8IZM8 581 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 ANKLE1Q8NAG6 615 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 LRRC2Q9BYS8 371 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 KATNBL1Q9H079 304 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 VAT1LQ9HCJ6 419 aa13.69□□□□□ -0.22
HMGXB3-203ENST00000510472 ZBTB5O15062 677 aa13.68□□□□□ -0.22
HMGXB3-203ENST00000510472 MSCO60682 206 aa13.68□□□□□ -0.22
HMGXB3-203ENST00000510472 FBXL16Q8N461 479 aa13.68□□□□□ -0.22
HMGXB3-203ENST00000510472 MORC4Q8TE76 937 aa13.68□□□□□ -0.22
HMGXB3-203ENST00000510472 PURBQ96QR8 312 aaKnown RBP13.68□□□□□ -0.22
HMGXB3-203ENST00000510472 MYL10Q9BUA6 226 aa13.68□□□□□ -0.22
HMGXB3-203ENST00000510472 OPLAHO14841 1288 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 FARP2O94887 1054 aaPredicted RBP13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 GHRHRQ02643 423 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 NSMFQ6X4W1 530 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 CCDC144CPQ8IYA2 1237 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 TBC1D5Q92609 795 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 TCEANC2Q96MN5 208 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 SPZ1Q9BXG8 430 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 AMNQ9BXJ7 453 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 AGXT2Q9BYV1 514 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 CDKN2AIPQ9NXV6 580 aaPredicted RBP13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 BRPF3Q9ULD4 1205 aa13.67□□□□□ -0.22
HMGXB3-203ENST00000510472 ABCB11O95342 1321 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 LOC102724159A0A0B4J2E5 919 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 CCDC69A6NI79 296 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 CALM1P0DP23 149 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 CALM2P0DP24 149 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 CALM3P0DP25 149 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 COL6A1P12109 1028 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 CNGA1P29973 690 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 KIF5BP33176 963 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 RPS6P62753 249 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 ACVR2BQ13705 512 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 PWP2Q15269 919 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 USH1GQ495M9 461 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 APOA5Q6Q788 366 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 SLC30A10Q6XR72 485 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 NFXL1Q6ZNB6 911 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 ARMCX2Q7L311 632 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 FBXO11Q86XK2 927 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 SRBD1Q8N5C6 995 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 DIS3LQ8TF46 1054 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 NUP133Q8WUM0 1156 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 PAWRQ96IZ0 340 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 JAKMIP1Q96N16 626 aaKnown RBP13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 PIGSQ96S52 555 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 LZTS2Q9BRK4 669 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 ABHD16BQ9H3Z7 469 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 CNPY2Q9Y2B0 182 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 SLC12A7Q9Y666 1083 aa13.66□□□□□ -0.22
HMGXB3-203ENST00000510472 PNMA6FA0A0J9YX94 578 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 ASB14A6NK59 587 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 CPA1P15085 419 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 RXRAP19793 462 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 EDNRBP24530 442 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 GNAQP50148 359 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 FUT2Q10981 343 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 RNF207Q6ZRF8 634 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 CTCFLQ8NI51 663 aaPredicted RBP13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 ZSWIM6Q9HCJ5 1215 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 FAM217BQ9NTX9 383 aaPredicted RBP13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 MRPL11Q9Y3B7 192 aaKnown RBP13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 PCDHA1Q9Y5I3 950 aa13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 DDX49Q9Y6V7 483 aaKnown RBP13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 TNRC18O15417 2968 aaPredicted RBP13.65□□□□□ -0.22
HMGXB3-203ENST00000510472 SMCHD1A6NHR9 2005 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 PTPDC1A2A3K4 754 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 DHX16O60231 1041 aaKnown RBP13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 PLEKHA8P1O95397 391 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 RPS6KB1P23443 525 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 PSMA5P28066 241 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 RCAN1P53805 252 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 EVCP57679 992 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 NKX3-2P78367 333 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 NECAB2Q7Z6G3 386 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 DNERQ8NFT8 737 aa13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 SYTL5Q8TDW5 730 aaPredicted RBP13.64□□□□□ -0.23
HMGXB3-203ENST00000510472 IL17RAQ96F46 866 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms