RNA–Protein interactions for RNA: ENST00000510171.3

DDX41-211, Transcript of DEAD-box helicase 41, humanhuman

TSL 3

Gene DDX41, Length 569 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX41-211ENST00000510171 ASB2Q96Q27 587 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 DCTPP1Q9H773 170 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 SLC28A3Q9HAS3 691 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 CXXC1Q9P0U4 656 aaPredicted RBP12.37□□□□□ -0.43
DDX41-211ENST00000510171 Q9Y3F1 56 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 LAMA2P24043 3122 aaKnown RBP12.37□□□□□ -0.43
DDX41-211ENST00000510171 ASTN1O14525 1302 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 ZNF536O15090 1300 aa12.37□□□□□ -0.43
DDX41-211ENST00000510171 PLA2G6O60733 806 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 SMPD1P17405 629 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 CCL23P55773 120 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 PPARAQ07869 468 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 ADGRE1Q14246 886 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 CCDC85BQ15834 202 aaPredicted RBP12.36□□□□□ -0.43
DDX41-211ENST00000510171 C20orf194Q5TEA3 1177 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 RCSD1Q6JBY9 416 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 OTOP2Q7RTS6 562 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 RPUSD2Q8IZ73 545 aaKnown RBP12.36□□□□□ -0.43
DDX41-211ENST00000510171 NAPBQ9H115 298 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 TRPV6Q9H1D0 765 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 SMCHD1A6NHR9 2005 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 GRIN2DO15399 1336 aa12.36□□□□□ -0.43
DDX41-211ENST00000510171 SNAP25P60880 206 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 MRPS5P82675 430 aaKnown RBP12.35□□□□□ -0.43
DDX41-211ENST00000510171 EEPD1Q7L9B9 569 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 SEC62Q99442 399 aaKnown RBP12.35□□□□□ -0.43
DDX41-211ENST00000510171 NOC4LQ9BVI4 516 aaKnown RBP12.35□□□□□ -0.43
DDX41-211ENST00000510171 PDGFCQ9NRA1 345 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 CYP39A1Q9NYL5 469 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 THEGQ9P2T0 379 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 STX8Q9UNK0 236 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 UMODL1Q5DID0 1318 aa12.35□□□□□ -0.43
DDX41-211ENST00000510171 PLIN4Q96Q06 1357 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 TSPY2A6NKD2 308 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 ERC2O15083 957 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 B4GALT4O60513 344 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 PTGS1P23219 599 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 PSMC6P62333 389 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 MUM1L1Q5H9M0 696 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 TAPT1Q6NXT6 567 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 KIAA1211Q6ZU35 1233 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 KCTD1Q719H9 257 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 IL27Q8NEV9 243 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 VTA1Q9NP79 307 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 PRR12Q9ULL5 1215 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 YBX2Q9Y2T7 364 aaKnown RBP12.34□□□□□ -0.43
DDX41-211ENST00000510171 SLC4A7Q9Y6M7 1214 aa12.34□□□□□ -0.43
DDX41-211ENST00000510171 DDX49Q9Y6V7 483 aaKnown RBP12.34□□□□□ -0.43
DDX41-211ENST00000510171 BAZ2AQ9UIF9 1905 aaKnown RBP12.33□□□□□ -0.44
DDX41-211ENST00000510171 SUPT20HL2P0C7V6 817 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 COL9A1P20849 921 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 RABGGTBP53611 331 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 TMEM63BQ5T3F8 832 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 NSMFQ6X4W1 530 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 FBXO16Q8IX29 292 aaPredicted RBP12.33□□□□□ -0.44
DDX41-211ENST00000510171 FSD1Q9BTV5 496 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 TSPYL2Q9H2G4 693 aaPredicted RBP12.33□□□□□ -0.44
DDX41-211ENST00000510171 IL17RBQ9NRM6 502 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 CCPG1Q9ULG6 757 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 MTMR7Q9Y216 660 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 TTC41PQ6P2S7 1318 aa12.33□□□□□ -0.44
DDX41-211ENST00000510171 ZNFX1Q9P2E3 1918 aaKnown RBP12.33□□□□□ -0.44
DDX41-211ENST00000510171 ICAM1P05362 532 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 BAATQ14032 418 aaPredicted RBP12.32□□□□□ -0.44
DDX41-211ENST00000510171 DUSP28Q4G0W2 176 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 ZMYM1Q5SVZ6 1142 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 PPP2R2DQ66LE6 453 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 ADAMTS19Q8TE59 1207 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 MORC4Q8TE76 937 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 SCLYQ96I15 445 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 PURBQ96QR8 312 aaKnown RBP12.32□□□□□ -0.44
DDX41-211ENST00000510171 WNT8AQ9H1J5 351 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 ALDH8A1Q9H2A2 487 aaPredicted RBP12.32□□□□□ -0.44
DDX41-211ENST00000510171 INCENPQ9NQS7 918 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 ADD3Q9UEY8 706 aaKnown RBP12.32□□□□□ -0.44
DDX41-211ENST00000510171 PCDHA11Q9Y5I1 949 aa12.32□□□□□ -0.44
DDX41-211ENST00000510171 COL11A1P12107 1806 aaPredicted RBP12.32□□□□□ -0.44
DDX41-211ENST00000510171 ZBBXA8MT70 800 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 RANBP6O60518 1105 aaKnown RBP12.31□□□□□ -0.44
DDX41-211ENST00000510171 NMT2O60551 498 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 PFKMP08237 780 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 MYOGP15173 224 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 ATP2A2P16615 1042 aaKnown RBP12.31□□□□□ -0.44
DDX41-211ENST00000510171 CTDSPL2Q05D32 466 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 CCDC96Q2M329 555 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 PI4K2BQ8TCG2 481 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 DCAF4Q8WV16 495 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 UHRF1Q96T88 793 aaPredicted RBP12.31□□□□□ -0.44
DDX41-211ENST00000510171 WDR11Q9BZH6 1224 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 RANBP17Q9H2T7 1088 aaKnown RBP12.31□□□□□ -0.44
DDX41-211ENST00000510171 GPHNQ9NQX3 736 aaPredicted RBP12.31□□□□□ -0.44
DDX41-211ENST00000510171 POLR3EQ9NVU0 708 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 DDX52Q9Y2R4 599 aaKnown RBP eCLIP12.31□□□□□ -0.44
DDX41-211ENST00000510171 PARP14Q460N5 1801 aa12.31□□□□□ -0.44
DDX41-211ENST00000510171 EYSQ5T1H1 3165 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 VCANP13611 3396 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 LOC102724159A0A0B4J2E5 919 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 MYL3P08590 195 aa12.3□□□□□ -0.44
DDX41-211ENST00000510171 CYP2C9P11712 490 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 15.5 ms