RNA–Protein interactions for RNA: ENST00000509860.1

PRDM16-205, Transcript of PR/SET domain 16, humanhuman

TSL 5

Gene PRDM16, Length 3,737 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM16-205ENST00000509860 ZNF75DP51815 510 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 JAKMIP3Q5VZ66 844 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 CCDC84Q86UT8 332 aaPredicted RBP14.19□□□□□ -0.14
PRDM16-205ENST00000509860 FAM83AQ86UY5 434 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 TBCKQ8TEA7 893 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 VEZTQ9HBM0 779 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 ZBTB21Q9ULJ3 1066 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 SSC5DA1L4H1 1573 aa14.19□□□□□ -0.14
PRDM16-205ENST00000509860 MORC3Q14149 939 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 CCDC96Q2M329 555 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 ARL6IP4Q66PJ3 421 aaKnown RBP14.18□□□□□ -0.14
PRDM16-205ENST00000509860 SARM1Q6SZW1 724 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 DHX58Q96C10 678 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 hCG_1984214I3L0E3 225 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 DPYDQ12882 1025 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 POTEDQ86YR6 584 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 ZNF713Q8N859 430 aaPredicted RBP14.18□□□□□ -0.14
PRDM16-205ENST00000509860 MTMR9Q96QG7 549 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 HDAC9Q9UKV0 1011 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 CCDC194A0A1B0GVG4 234 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 SAMD7Q7Z3H4 446 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 OGFOD1Q8N543 542 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 CRYGNQ8WXF5 182 aa14.18□□□□□ -0.14
PRDM16-205ENST00000509860 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP14.18□□□□□ -0.14
PRDM16-205ENST00000509860 BMP15O95972 392 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 MSNP26038 577 aaKnown RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 GMPSP49915 693 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 FMR1Q06787 632 aaKnown RBP eCLIP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 CDC37Q16543 378 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 BTNL9Q6UXG8 535 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 MMTAG2Q9BU76 263 aaKnown RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 C6orf50Q9HD87 102 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 NRBP1Q9UHY1 535 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 OTOFQ9HC10 1997 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 TDP2O95551 362 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 CAVIN2O95810 425 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 SLFN14P0C7P3 912 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 SLC1A4P43007 532 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 IRX3P78415 501 aaPredicted RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 RBM26Q5T8P6 1007 aaKnown RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 PPP1R18Q6NYC8 613 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 SPICE1Q8N0Z3 855 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 REXO1Q8N1G1 1221 aaKnown RBP14.17□□□□□ -0.14
PRDM16-205ENST00000509860 DGKZQ13574 1117 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 CCDC144BQ3MJ40 725 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 KRT25Q7Z3Z0 450 aa14.17□□□□□ -0.14
PRDM16-205ENST00000509860 MEIS2O14770 477 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 CD44P16070 742 aaKnown RBP14.16□□□□□ -0.14
PRDM16-205ENST00000509860 ADCY7P51828 1080 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 NONOQ15233 471 aaKnown RBP eCLIP14.16□□□□□ -0.14
PRDM16-205ENST00000509860 TMX2Q9Y320 296 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 POLR2AP24928 1970 aaKnown RBP14.16□□□□□ -0.14
PRDM16-205ENST00000509860 CCNT1O60563 726 aaKnown RBP14.16□□□□□ -0.14
PRDM16-205ENST00000509860 LETM2Q2VYF4 491 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 STAMQ92783 540 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 GNA11P29992 359 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 NEK8Q86SG6 692 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 MICALL2Q8IY33 904 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 GJA10Q969M2 543 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 ZBTB9Q96C00 473 aa14.16□□□□□ -0.14
PRDM16-205ENST00000509860 COL11A1P12107 1806 aaPredicted RBP14.15□□□□□ -0.14
PRDM16-205ENST00000509860 LONP1P36776 959 aaKnown RBP14.15□□□□□ -0.14
PRDM16-205ENST00000509860 CAP2P40123 477 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 PRPHP41219 470 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 KARSQ15046 597 aaKnown RBP14.15□□□□□ -0.14
PRDM16-205ENST00000509860 ZSCAN30Q86W11 494 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 CEP57L1Q8IYX8 460 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L15C9J2P7 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L13C9JLJ4 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L11C9JVI0 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L18D6R9N7 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L22D6RA61 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L17D6RBQ6 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L19D6RCP7 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L20D6RJB6 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L24Q0WX57 530 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 RASA3Q14644 834 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 USP17L6PQ6QN14 398 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 CCDC12Q8WUD4 166 aaPredicted RBP14.15□□□□□ -0.14
PRDM16-205ENST00000509860 ATP1A3P13637 1013 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 HAS1Q92839 578 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 TTC12Q9H892 705 aaPredicted RBP14.15□□□□□ -0.14
PRDM16-205ENST00000509860 ZKSCAN5Q9Y2L8 839 aa14.15□□□□□ -0.14
PRDM16-205ENST00000509860 LOC285556D6RIA3 1793 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 CUL4BQ13620 913 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 IGSF22Q8N9C0 903 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 SYNPO2Q9UMS6 1093 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 AFMP43652 599 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 SPC24Q8NBT2 197 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 JDP2Q8WYK2 163 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 TRIM34Q9BYJ4 488 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 TMEM232C9JQI7 657 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 MMP14P50281 582 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 TBC1D10BQ4KMP7 808 aaPredicted RBP14.14□□□□□ -0.15
PRDM16-205ENST00000509860 TMOD2Q9NZR1 351 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 CCDC39Q9UFE4 941 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 PRR12Q9ULL5 1215 aa14.14□□□□□ -0.15
PRDM16-205ENST00000509860 RAD21O60216 631 aa14.13□□□□□ -0.15
PRDM16-205ENST00000509860 BMP3P12645 472 aa14.13□□□□□ -0.15
PRDM16-205ENST00000509860 RPS12P25398 132 aaKnown RBP14.13□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms