RNA–Protein interactions for RNA: ENST00000509529.1

CAST-226, Transcript of calpastatin, humanhuman

TSL 2

Gene CAST, Length 3,066 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAST-226ENST00000509529 KIF2CQ99661 725 aa2.7□□□□□ -1.98
CAST-226ENST00000509529 ZKSCAN7Q9P0L1 754 aaPredicted RBP2.7□□□□□ -1.98
CAST-226ENST00000509529 R3HCC1Q9Y3T6 440 aaKnown RBP2.7□□□□□ -1.98
CAST-226ENST00000509529 CDC42BPBQ9Y5S2 1711 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 NOS1P29475 1434 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 CPSF1Q10570 1443 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 CCDC171Q6TFL3 1326 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 KIF2AO00139 706 aaPredicted RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 AKAP8O43823 692 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 H2AFXP16104 143 aaPredicted RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 ERCC3P19447 782 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 ICA1Q05084 483 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 ZSCAN23Q3MJ62 389 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 DNTTIP2Q5QJE6 756 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 FAM9BQ8IZU0 186 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 JMYQ8N9B5 988 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 LSM14AQ8ND56 463 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 SNRNP27Q8WVK2 155 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 ADAM7Q9H2U9 754 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 NPHS2Q9NP85 383 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 CCDC87Q9NVE4 849 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 SLC52A1Q9NWF4 448 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 ZHX1Q9UKY1 873 aaPredicted RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 VWDEQ8N2E2 1590 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 CCDC189A1A4V9 331 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 PPP1R12AO14974 1030 aaPredicted RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 NEMFO60524 1076 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 CASQ1P31415 396 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 TUBB4BP68371 445 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 NCBP1Q09161 790 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 NOLC1Q14978 699 aaKnown RBP eCLIP2.69□□□□□ -1.98
CAST-226ENST00000509529 BMP2KLQ5H9B9 411 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 RPS26P11Q5JNZ5 115 aaPredicted RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 CC2D1BQ5T0F9 858 aaKnown RBP2.69□□□□□ -1.98
CAST-226ENST00000509529 CCDC30Q5VVM6 783 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 ARMCX6Q7L4S7 300 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 HSCBQ8IWL3 235 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 TMC1Q8TDI8 760 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 STK35Q8TDR2 534 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 ITFG2Q969R8 447 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 C19orf44Q9H6X5 657 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 SP110Q9HB58 689 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 CSADQ9Y600 493 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 ERBINQ96RT1 1412 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 PREX1Q8TCU6 1659 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 QRICH2Q9H0J4 1663 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 GLI2P10070 1586 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 IL16Q14005 1332 aa2.69□□□□□ -1.98
CAST-226ENST00000509529 SETD1AO15047 1707 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 RAPGEF6Q8TEU7 1601 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 MAP3K5Q99683 1374 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 OVOL3O00110 214 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PDLIM1O00151 329 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 RFXAPO00287 272 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 DHX16O60231 1041 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 BAG4O95429 457 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 CAVIN2O95810 425 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 IGHA2P01877 340 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 RBM6P78332 1123 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 SRPK2P78362 688 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 C22orf34Q6ZV56 151 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 IRF2BP1Q8IU81 584 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 TMEM151BQ8IW70 566 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 WDR63Q8IWG1 891 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 MAGEC3Q8TD91 643 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PANK1Q8TE04 598 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 UBE2FQ969M7 185 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 ZNF428Q96B54 188 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 INTS4Q96HW7 963 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 FUCA2Q9BTY2 467 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 C22orf23Q9BZE7 217 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PANK3Q9H999 370 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 L2HGDHQ9H9P8 463 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 CAPN6Q9Y6Q1 641 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 ADAMTS12P58397 1594 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 ABCC11Q96J66 1382 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 TRPM2O94759 1503 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP2.68□□□□□ -1.98
CAST-226ENST00000509529 SYCP2Q9BX26 1530 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PEX10O60683 326 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 SLITRK5O94991 958 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 ATG7O95352 703 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PI3P19957 117 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 ATP2B1P20020 1258 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 CHMLP26374 656 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PTCH1Q13635 1447 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 SPATS1Q496A3 300 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 FAM135BQ49AJ0 1406 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 NBPF6Q5VWK0 638 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 CCDC91Q7Z6B0 441 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 NBPF5PQ86XG9 351 aaPredicted RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 OTUD6BQ8N6M0 293 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 NBPF4Q96M43 638 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 PAGR1Q9BTK6 254 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 FAM107BQ9H098 131 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 ADAMTS10Q9H324 1103 aa2.68□□□□□ -1.98
CAST-226ENST00000509529 YTHDC2Q9H6S0 1430 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 TPX2Q9ULW0 747 aaKnown RBP2.68□□□□□ -1.98
CAST-226ENST00000509529 KIAA0556O60303 1618 aa2.68□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 60.4 ms