RNA–Protein interactions for RNA: ENST00000509436.1

NDFIP1-204, Transcript of Nedd4 family interacting protein 1, humanhuman

TSL 5

Gene NDFIP1, Length 584 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDFIP1-204ENST00000509436 PRDM5Q9NQX1 630 aaPredicted RBP18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 SYNPO2Q9UMS6 1093 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 ZSCAN21Q9Y5A6 473 aaPredicted RBP18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 NID2Q14112 1375 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 MUC6Q6W4X9 2439 aa18.75■□□□□ 0.59
NDFIP1-204ENST00000509436 CHD7Q9P2D1 2997 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 CCDC196A0A1B0GTZ2 297 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 TRIM43BA6NCK2 446 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 MSCO60682 206 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 EPHB4P54760 987 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 JAG1P78504 1218 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 SCRN1Q12765 414 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 RTN1Q16799 776 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 CPLX2Q6PUV4 134 aaKnown RBP18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 SH3RF1Q7Z6J0 888 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 RAB11FIP4Q86YS3 637 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 GPRC5AQ8NFJ5 357 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 CTCFLQ8NI51 663 aaPredicted RBP18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 MKL1Q969V6 931 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 TRIM43Q96BQ3 446 aaPredicted RBP18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 INTS4Q96HW7 963 aaKnown RBP18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 MAP3K14Q99558 947 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 MYL10Q9BUA6 226 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 AS3MTQ9HBK9 375 aa18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 RBM28Q9NW13 759 aaKnown RBP18.74■□□□□ 0.59
NDFIP1-204ENST00000509436 TCF20Q9UGU0 1960 aaKnown RBP18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 USP17L5A8MUK1 530 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 CPLX1O14810 134 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 RXRAP19793 462 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 KIF5BP33176 963 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 SLC4A3P48751 1232 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 TROAPQ12815 778 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 GPR142Q7Z601 462 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 LRRC47Q8N1G4 583 aaKnown RBP18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 FANCBQ8NB91 859 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 PPM1EQ8WY54 764 aa18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 NECAB3Q96P71 396 aaPredicted RBP18.73■□□□□ 0.59
NDFIP1-204ENST00000509436 CDKL5O76039 1030 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 ITGB8P26012 769 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 TRIM60Q495X7 471 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 C1orf53Q5VUE5 145 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 CCDC144CPQ8IYA2 1237 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 P2RX7Q99572 595 aaKnown RBP18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 LLPHQ9BRT6 129 aaKnown RBP18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 PORCNQ9H237 461 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 GOPCQ9HD26 462 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 FLRT1Q9NZU1 646 aa18.72■□□□□ 0.59
NDFIP1-204ENST00000509436 HSFX4A0A1B0GTS1 333 aaPredicted RBP18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 HSFX3A0A1B0GWH4 333 aaPredicted RBP18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 BMP1P13497 986 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 HOXA7P31268 230 aaPredicted RBP18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 GNAQP50148 359 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 GRM4Q14833 912 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 Q3C1V9 767 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 SPRYD3Q8NCJ5 442 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 TIFAQ96CG3 184 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 GAS2L1Q99501 681 aaPredicted RBP18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 FEZ1Q99689 392 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 NCOA5Q9HCD5 579 aaKnown RBP18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 RBPJLQ9UBG7 517 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 MTMR7Q9Y216 660 aa18.71■□□□□ 0.59
NDFIP1-204ENST00000509436 IGHA2P01877 340 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 PARP1P09874 1014 aaKnown RBP18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 HERVK_113P62684 666 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 ST3GAL1Q11201 340 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 PLEKHH3Q7Z736 793 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 SIAH1Q8IUQ4 282 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 GMCL1P1Q8NEA9 526 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 DCAF4Q8WV16 495 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 FOXD4L1Q9NU39 408 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 PLXNA1Q9UIW2 1896 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 SMC3Q9UQE7 1217 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 TMX2Q9Y320 296 aa18.7■□□□□ 0.58
NDFIP1-204ENST00000509436 BAZ2BQ9UIF8 2168 aaKnown RBP18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 RAD21O60216 631 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 ERVK-9P63128 1117 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 ERVK-24P63145 666 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 IRX3P78415 501 aaPredicted RBP18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 MAP2K5Q13163 448 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 ASPRV1Q53RT3 343 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 GJC2Q5T442 439 aaPredicted RBP18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 SLFN13Q68D06 897 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 ALYREFQ86V81 257 aaKnown RBP18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 ACER1Q8TDN7 264 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 LZTS2Q9BRK4 669 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 WDR18Q9BV38 432 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 TRANK1O15050 2925 aa18.69■□□□□ 0.58
NDFIP1-204ENST00000509436 A0A1W2PRG0 241 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 PDHBP11177 359 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 CDC27P30260 824 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 ADD1P35611 737 aaKnown RBP18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 USP14P54578 494 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 HMGN5P82970 282 aaKnown RBP18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 ADGRE1Q14246 886 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 CCDC96Q2M329 555 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 MFSD14CQ5VZR4 134 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 TRPV1Q8NER1 839 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 EPHX3Q9H6B9 360 aa18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 CWC22Q9HCG8 908 aaKnown RBP18.68■□□□□ 0.58
NDFIP1-204ENST00000509436 FAM217BQ9NTX9 383 aaPredicted RBP18.68■□□□□ 0.58
Retrieved 100 of 20,778 RNA–protein pairs in 246.5 ms