RNA–Protein interactions for RNA: ENST00000509328.1

HOXC6-204, Transcript of homeobox C6, humanhuman

TSL 3

Gene HOXC6, Length 358 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC6-204ENST00000509328 FLRT1Q9NZU1 646 aa23.44■■□□□ 1.34
HOXC6-204ENST00000509328 PFASO15067 1338 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 DNAJC25-GNG10A0A024R161 153 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 ZBTB5O15062 677 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 CYTH3O43739 400 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 USH1GQ495M9 461 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 FBXO11Q86XK2 927 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 MAML3Q96JK9 1138 aa23.43■■□□□ 1.34
HOXC6-204ENST00000509328 UPF3BQ9BZI7 483 aaKnown RBP23.43■■□□□ 1.34
HOXC6-204ENST00000509328 A1CFQ9NQ94 594 aaKnown RBP23.43■■□□□ 1.34
HOXC6-204ENST00000509328 ABCB11O95342 1321 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 LCTP09848 1927 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 MYCP01106 439 aaPredicted RBP23.42■■□□□ 1.34
HOXC6-204ENST00000509328 APOBRQ0VD83 1088 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 MTFR1Q15390 333 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 MFSD14CQ5VZR4 134 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 CLEC4DQ8WXI8 215 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 PIGSQ96S52 555 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 TMEM106CQ9BVX2 250 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 AMNQ9BXJ7 453 aa23.42■■□□□ 1.34
HOXC6-204ENST00000509328 RBM28Q9NW13 759 aaKnown RBP23.42■■□□□ 1.34
HOXC6-204ENST00000509328 PLEKHA8P1O95397 391 aa23.41■■□□□ 1.34
HOXC6-204ENST00000509328 IGHA2P01877 340 aa23.41■■□□□ 1.34
HOXC6-204ENST00000509328 CCL5P13501 91 aa23.41■■□□□ 1.34
HOXC6-204ENST00000509328 TRIM32Q13049 653 aa23.41■■□□□ 1.34
HOXC6-204ENST00000509328 TRAF1Q13077 416 aa23.41■■□□□ 1.34
HOXC6-204ENST00000509328 HOMER1Q86YM7 354 aa23.41■■□□□ 1.34
HOXC6-204ENST00000509328 SRBD1Q8N5C6 995 aaKnown RBP23.41■■□□□ 1.34
HOXC6-204ENST00000509328 NAP1L2Q9ULW6 460 aaPredicted RBP23.41■■□□□ 1.34
HOXC6-204ENST00000509328 MCM3APO60318 1980 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 PNMA6FA0A0J9YX94 578 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 GOLGA8AA7E2F4 631 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 GOLGA8BA8MQT2 603 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 NFIBO00712 420 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 PRKAR2AP13861 404 aaKnown RBP23.4■■□□□ 1.34
HOXC6-204ENST00000509328 EVCP57679 992 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 PPP2R5BQ15173 497 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 RTN1Q16799 776 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 MAP3K21Q5TCX8 1036 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 NSMFQ6X4W1 530 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 TMTC3Q6ZXV5 915 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 RRP36Q96EU6 259 aaKnown RBP23.4■■□□□ 1.34
HOXC6-204ENST00000509328 UNC93B1Q9H1C4 597 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 PDRG1Q9NUG6 133 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 CYP39A1Q9NYL5 469 aa23.4■■□□□ 1.34
HOXC6-204ENST00000509328 RPTORQ8N122 1335 aa23.39■■□□□ 1.34
HOXC6-204ENST00000509328 KIAA0100Q14667 2235 aaKnown RBP23.39■■□□□ 1.34
HOXC6-204ENST00000509328 POTEB2H3BUK9 544 aa23.39■■□□□ 1.33
HOXC6-204ENST00000509328 CAPN15O75808 1086 aa23.39■■□□□ 1.33
HOXC6-204ENST00000509328 CACNB2Q08289 660 aaPredicted RBP23.39■■□□□ 1.33
HOXC6-204ENST00000509328 TOB2Q14106 344 aaPredicted RBP23.39■■□□□ 1.33
HOXC6-204ENST00000509328 ZNF467Q7Z7K2 595 aaPredicted RBP23.39■■□□□ 1.33
HOXC6-204ENST00000509328 MSL3Q8N5Y2 521 aaKnown RBP23.39■■□□□ 1.33
HOXC6-204ENST00000509328 FAM133AQ8N9E0 248 aa23.39■■□□□ 1.33
HOXC6-204ENST00000509328 MAF1Q9H063 256 aa23.39■■□□□ 1.33
HOXC6-204ENST00000509328 RNF208Q9H0X6 261 aa23.39■■□□□ 1.33
HOXC6-204ENST00000509328 HMX1Q9NP08 348 aaPredicted RBP23.39■■□□□ 1.33
HOXC6-204ENST00000509328 MRPL11Q9Y3B7 192 aaKnown RBP23.39■■□□□ 1.33
HOXC6-204ENST00000509328 PPP1R11O60927 126 aaPredicted RBP23.38■■□□□ 1.33
HOXC6-204ENST00000509328 CYP2C19P33261 490 aa23.38■■□□□ 1.33
HOXC6-204ENST00000509328 METAP2P50579 478 aaKnown RBP eCLIP23.38■■□□□ 1.33
HOXC6-204ENST00000509328 CMTR1Q8N1G2 835 aaKnown RBP23.38■■□□□ 1.33
HOXC6-204ENST00000509328 RGS22Q8NE09 1264 aa23.38■■□□□ 1.33
HOXC6-204ENST00000509328 TINF2Q9BSI4 451 aa23.38■■□□□ 1.33
HOXC6-204ENST00000509328 PCDHA1Q9Y5I3 950 aa23.38■■□□□ 1.33
HOXC6-204ENST00000509328 NID2Q14112 1375 aa23.38■■□□□ 1.33
HOXC6-204ENST00000509328 CCDC196A0A1B0GTZ2 297 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 PTPDC1A2A3K4 754 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 SOX10P56693 466 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 CNTN2Q02246 1040 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 BAATQ14032 418 aaPredicted RBP23.37■■□□□ 1.33
HOXC6-204ENST00000509328 RNF207Q6ZRF8 634 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 MCF2L2Q86YR7 1114 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 PIBF1Q8WXW3 757 aa23.37■■□□□ 1.33
HOXC6-204ENST00000509328 XRN2Q9H0D6 950 aaKnown RBP eCLIP23.37■■□□□ 1.33
HOXC6-204ENST00000509328 ALDH8A1Q9H2A2 487 aaPredicted RBP23.37■■□□□ 1.33
HOXC6-204ENST00000509328 PAK6Q9NQU5 681 aaPredicted RBP23.37■■□□□ 1.33
HOXC6-204ENST00000509328 SEC63Q9UGP8 760 aaKnown RBP23.37■■□□□ 1.33
HOXC6-204ENST00000509328 GJB1P08034 283 aa23.36■■□□□ 1.33
HOXC6-204ENST00000509328 IFFO2Q5TF58 517 aa23.36■■□□□ 1.33
HOXC6-204ENST00000509328 MAMDC4Q6UXC1 1216 aa23.36■■□□□ 1.33
HOXC6-204ENST00000509328 FGD4Q96M96 766 aa23.36■■□□□ 1.33
HOXC6-204ENST00000509328 FAM217BQ9NTX9 383 aaPredicted RBP23.36■■□□□ 1.33
HOXC6-204ENST00000509328 SYNGAP1Q96PV0 1343 aa23.35■■□□□ 1.33
HOXC6-204ENST00000509328 PDIA3P30101 505 aaKnown RBP23.35■■□□□ 1.33
HOXC6-204ENST00000509328 CDC27P30260 824 aa23.35■■□□□ 1.33
HOXC6-204ENST00000509328 RPS6P62753 249 aaKnown RBP23.35■■□□□ 1.33
HOXC6-204ENST00000509328 SLC30A10Q6XR72 485 aa23.35■■□□□ 1.33
HOXC6-204ENST00000509328 CCDC82Q8N4S0 544 aa23.35■■□□□ 1.33
HOXC6-204ENST00000509328 C22orf23Q9BZE7 217 aa23.35■■□□□ 1.33
HOXC6-204ENST00000509328 FRMPD3Q5JV73 1810 aa23.35■■□□□ 1.33
HOXC6-204ENST00000509328 CNTNAP5Q8WYK1 1306 aa23.34■■□□□ 1.33
HOXC6-204ENST00000509328 POTEFA5A3E0 1075 aa23.34■■□□□ 1.33
HOXC6-204ENST00000509328 SOWAHBA6NEL2 793 aa23.34■■□□□ 1.33
HOXC6-204ENST00000509328 CYBAP13498 195 aa23.34■■□□□ 1.33
HOXC6-204ENST00000509328 CALML3P27482 149 aa23.34■■□□□ 1.33
HOXC6-204ENST00000509328 ZNF274Q96GC6 653 aaPredicted RBP23.34■■□□□ 1.33
HOXC6-204ENST00000509328 UPF2Q9HAU5 1272 aaKnown RBP23.34■■□□□ 1.33
HOXC6-204ENST00000509328 ADD3Q9UEY8 706 aaKnown RBP23.34■■□□□ 1.33
HOXC6-204ENST00000509328 NRBP1Q9UHY1 535 aa23.34■■□□□ 1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms