RNA–Protein interactions for RNA: ENST00000509162.1

TOPBP1-207, Transcript of DNA topoisomerase II binding protein 1, humanhuman

TSL 2

Gene TOPBP1, Length 811 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOPBP1-207ENST00000509162 ARID3AQ99856 593 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 SPATC1LQ9H0A9 340 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 ANO2Q9NQ90 1003 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 TOMM22Q9NS69 142 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 CDKN2AIPQ9NXV6 580 aaPredicted RBP8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 ZSWIM5Q9P217 1185 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 PLXNA1Q9UIW2 1896 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 SYNPO2Q9UMS6 1093 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 STX8Q9UNK0 236 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 MTMR7Q9Y216 660 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 RABGAP1Q9Y3P9 1069 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 DDX49Q9Y6V7 483 aaKnown RBP8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 DNAH12Q6ZR08 3092 aa8.5□□□□□ -1.05
TOPBP1-207ENST00000509162 ALPK3Q96L96 1907 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 COBLO75128 1261 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 RGS20O76081 388 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 FMNL1O95466 1100 aaPredicted RBP8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 GOLGA8HP0CJ92 632 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 PCP11498 1178 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 CPA1P15085 419 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 ERCC3P19447 782 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 SLC16A2P36021 539 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 FCGRTP55899 365 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 ZNF543Q08ER8 600 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 PABPC4Q13310 644 aaKnown RBP eCLIP8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 IMMTQ16891 758 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 MFSD6Q6ZSS7 791 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 GPRC5AQ8NFJ5 357 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 NPLOC4Q8TAT6 608 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 TCEANC2Q96MN5 208 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 SLF1Q9BQI6 1058 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 SH2D4AQ9H788 454 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 SLC38A10Q9HBR0 1119 aa8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 TSR3Q9UJK0 312 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 KIAA0100Q14667 2235 aaKnown RBP8.49□□□□□ -1.05
TOPBP1-207ENST00000509162 TMEM232C9JQI7 657 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 SH2B2O14492 632 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 RAD21O60216 631 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 PPP1R11O60927 126 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 INHAP05111 366 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 SLC3A2P08195 630 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 TOP1P11387 765 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 BMP3P12645 472 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 IRF5Q13568 498 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 COG2Q14746 738 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 MAP3K21Q5TCX8 1036 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 BTNL9Q6UXG8 535 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 NBPF11Q86T75 865 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 STAG2Q8N3U4 1231 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 TRPV1Q8NER1 839 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 PXYLP1Q8TE99 480 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 RUFY2Q8WXA3 655 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 KIFC2Q96AC6 838 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 ZSCAN10Q96SZ4 725 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 MYL10Q9BUA6 226 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 LRRC2Q9BYS8 371 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 RANBP17Q9H2T7 1088 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 RNF41Q9H4P4 317 aaPredicted RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 LY9Q9HBG7 655 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 RAVER2Q9HCJ3 691 aaKnown RBP8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 PRR12Q9ULL5 1215 aa8.48□□□□□ -1.05
TOPBP1-207ENST00000509162 OPLAHO14841 1288 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 MYCP01106 439 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 OATP04181 439 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 CYP2B6P20813 491 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 PKN2Q16513 984 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 MUM1L1Q5H9M0 696 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 PLEKHH3Q7Z736 793 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 RAB11FIP4Q86YS3 637 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 RIOX2Q8IUF8 465 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 CCDC82Q8N4S0 544 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 PNMA1Q8ND90 353 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 SHCBP1Q8NEM2 672 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 IGDCC4Q8TDY8 1250 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 GTF3C2Q8WUA4 911 aaPredicted RBP8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 DCAF4Q8WV16 495 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 ESR2Q92731 530 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 AGBL1Q96MI9 1066 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 PURBQ96QR8 312 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 UNC93B1Q9H1C4 597 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 ZNF287Q9HBT7 754 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 CTNNA3Q9UI47 895 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 SNX14Q9Y5W7 946 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 ADGRG1Q9Y653 693 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 MCM3APO60318 1980 aa8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 RANBP2P49792 3224 aaKnown RBP8.47□□□□□ -1.05
TOPBP1-207ENST00000509162 DNAJC25-GNG10A0A024R161 153 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 CCDC85CA6NKD9 419 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 ATP2A1O14983 1001 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 ADCY6O43306 1168 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 CYTH3O43739 400 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 ADCY3O60266 1144 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 PLA2G6O60733 806 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 PGK2P07205 417 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 HOXC6P09630 235 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 PTGS1P23219 599 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 ADORA2AP29274 412 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 MAPK4P31152 587 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 GRK4P32298 578 aa8.46□□□□□ -1.06
TOPBP1-207ENST00000509162 HSPA4P34932 840 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms