RNA–Protein interactions for RNA: ENST00000509102.5

UBE3D-207, Transcript of ubiquitin protein ligase E3D, humanhuman

TSL 1 (best)

Gene UBE3D, Length 1,246 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3D-207ENST00000509102 ADCYAP1R1P41586 468 aa21.79■■□□□ 1.08
UBE3D-207ENST00000509102 CASC1Q6TDU7 716 aa21.79■■□□□ 1.08
UBE3D-207ENST00000509102 MAP4K1Q92918 833 aa21.79■■□□□ 1.08
UBE3D-207ENST00000509102 RBM27Q9P2N5 1060 aaKnown RBP21.79■■□□□ 1.08
UBE3D-207ENST00000509102 A0A1W2PPC1 479 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 IFIT3O14879 490 aaKnown RBP21.78■■□□□ 1.08
UBE3D-207ENST00000509102 SYN1P17600 705 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 CCDC144BQ3MJ40 725 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 BMP2KLQ5H9B9 411 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 NOL8Q76FK4 1167 aaKnown RBP21.78■■□□□ 1.08
UBE3D-207ENST00000509102 CCDC136Q96JN2 1154 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 FGD4Q96M96 766 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 UBA5Q9GZZ9 404 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 ATP11BQ9Y2G3 1177 aa21.78■■□□□ 1.08
UBE3D-207ENST00000509102 LOC102724159A0A0B4J2E5 919 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 SOWAHBA6NEL2 793 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 E7EWF7 191 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 NEFLP07196 543 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 RTP1P59025 263 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 BAATQ14032 418 aaPredicted RBP21.77■■□□□ 1.08
UBE3D-207ENST00000509102 PWP2Q15269 919 aaKnown RBP21.77■■□□□ 1.08
UBE3D-207ENST00000509102 CDC37Q16543 378 aaPredicted RBP21.77■■□□□ 1.08
UBE3D-207ENST00000509102 SLC39A5Q6ZMH5 540 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 RNF207Q6ZRF8 634 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 NUP133Q8WUM0 1156 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 FERMT2Q96AC1 680 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 TSEN34Q9BSV6 310 aaKnown RBP21.77■■□□□ 1.08
UBE3D-207ENST00000509102 PHF24Q9UPV7 400 aa21.77■■□□□ 1.08
UBE3D-207ENST00000509102 RBM8AQ9Y5S9 174 aaKnown RBP21.77■■□□□ 1.08
UBE3D-207ENST00000509102 SYNRGQ9UMZ2 1314 aa21.77■■□□□ 1.07
UBE3D-207ENST00000509102 B4DLN1 442 aa21.76■■□□□ 1.07
UBE3D-207ENST00000509102 NFIBO00712 420 aa21.76■■□□□ 1.07
UBE3D-207ENST00000509102 MRPL12P52815 198 aaKnown RBP21.76■■□□□ 1.07
UBE3D-207ENST00000509102 USH1GQ495M9 461 aa21.76■■□□□ 1.07
UBE3D-207ENST00000509102 CYB5R4Q7L1T6 521 aa21.76■■□□□ 1.07
UBE3D-207ENST00000509102 PCSK9Q8NBP7 692 aaKnown RBP21.76■■□□□ 1.07
UBE3D-207ENST00000509102 LENG1Q96BZ8 264 aaPredicted RBP21.76■■□□□ 1.07
UBE3D-207ENST00000509102 LBHD1Q9BQE6 289 aaPredicted RBP21.76■■□□□ 1.07
UBE3D-207ENST00000509102 SMCHD1A6NHR9 2005 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 MOXD2PA6NHM9 499 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 ADAMTS4O75173 837 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 C6orf222P0C671 652 aaPredicted RBP21.75■■□□□ 1.07
UBE3D-207ENST00000509102 CALML3P27482 149 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 TNFAIP2Q03169 654 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 WTAPQ15007 396 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 SEC23AQ15436 765 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 ADGRF4Q8IZF3 695 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 ESYT1Q9BSJ8 1104 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 MAF1Q9H063 256 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 ABCB11O95342 1321 aa21.75■■□□□ 1.07
UBE3D-207ENST00000509102 BMP8BP34820 402 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 C1orf53Q5VUE5 145 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 MCF2L2Q86YR7 1114 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 GDF15Q99988 308 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 PRO3102Q9H379 93 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 CPVLQ9H3G5 476 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 VTA1Q9NP79 307 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 ANO2Q9NQ90 1003 aa21.74■■□□□ 1.07
UBE3D-207ENST00000509102 TRIOBPQ9H2D6 2365 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 A0A1W2PQ45 241 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-207ENST00000509102 A0A1W2PQY0 241 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 KLRF2D3W0D1 207 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 MAGEA10P43363 369 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-207ENST00000509102 ALDH5A1P51649 535 aaPredicted RBP21.73■■□□□ 1.07
UBE3D-207ENST00000509102 ACLYP53396 1101 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 TRAF1Q13077 416 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 TMEM67Q5HYA8 995 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 CATIPQ7Z7H3 387 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 FBXO11Q86XK2 927 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 RGS22Q8NE09 1264 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 CLEC4DQ8WXI8 215 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 GLT1D1Q96MS3 346 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 AP5M1Q9H0R1 490 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 VAT1LQ9HCJ6 419 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 STARD7Q9NQZ5 370 aa21.73■■□□□ 1.07
UBE3D-207ENST00000509102 MRPL11Q9Y3B7 192 aaKnown RBP21.73■■□□□ 1.07
UBE3D-207ENST00000509102 MCM3APO60318 1980 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 CST5P28325 142 aaPredicted RBP21.72■■□□□ 1.07
UBE3D-207ENST00000509102 FXR1P51114 621 aaKnown RBP eCLIP21.72■■□□□ 1.07
UBE3D-207ENST00000509102 GJA9P57773 515 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 RPS6P62753 249 aaKnown RBP21.72■■□□□ 1.07
UBE3D-207ENST00000509102 SNX17Q15036 470 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 KCNA10Q16322 511 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 TRIM60Q495X7 471 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 GNASQ5JWF2 1037 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 RNF20Q5VTR2 975 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 IQSEC1Q6DN90 963 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 SLC30A10Q6XR72 485 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 EEPD1Q7L9B9 569 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 KLHDC9Q8NEP7 349 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 DNERQ8NFT8 737 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 UBE2OQ9C0C9 1292 aaKnown RBP21.72■■□□□ 1.07
UBE3D-207ENST00000509102 KATNBL1Q9H079 304 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 PRDM5Q9NQX1 630 aaPredicted RBP21.72■■□□□ 1.07
UBE3D-207ENST00000509102 DNAH12Q6ZR08 3092 aa21.72■■□□□ 1.07
UBE3D-207ENST00000509102 PDE4DQ08499 809 aa21.71■■□□□ 1.07
UBE3D-207ENST00000509102 QRICH1Q2TAL8 776 aa21.71■■□□□ 1.07
UBE3D-207ENST00000509102 FBXO16Q8IX29 292 aaPredicted RBP21.71■■□□□ 1.07
UBE3D-207ENST00000509102 MORC4Q8TE76 937 aa21.71■■□□□ 1.07
UBE3D-207ENST00000509102 VTI1AQ96AJ9 217 aa21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms