RNA–Protein interactions for RNA: ENST00000508963.1

RACK1-220, Transcript of receptor for activated C kinase 1, humanhuman

TSL 2

Gene RACK1, Length 581 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RACK1-220ENST00000508963 TRAF1Q13077 416 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 NOM1Q5C9Z4 860 aaKnown RBP7.23□□□□□ -1.25
RACK1-220ENST00000508963 MUM1L1Q5H9M0 696 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 EARS2Q5JPH6 523 aaKnown RBP7.23□□□□□ -1.25
RACK1-220ENST00000508963 GALNT17Q6IS24 598 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 CCDC174Q6PII3 467 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 HEATR3Q7Z4Q2 680 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 TEX2Q8IWB9 1127 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 CPXCR1Q8N123 301 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 CFHR5Q9BXR6 569 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 MOV10L1Q9BXT6 1211 aaKnown RBP7.23□□□□□ -1.25
RACK1-220ENST00000508963 SPATC1LQ9H0A9 340 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 RIC8AQ9NPQ8 531 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 SEC63Q9UGP8 760 aaKnown RBP7.23□□□□□ -1.25
RACK1-220ENST00000508963 PNMA2Q9UL42 364 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 PCDHA6Q9UN73 950 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 PCDHA8Q9Y5H6 950 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 SMCHD1A6NHR9 2005 aa7.23□□□□□ -1.25
RACK1-220ENST00000508963 PIK3CDO00329 1044 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 ZSCAN22P10073 491 aaPredicted RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 HSD17B4P51659 736 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 NAPAP54920 295 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 NLRP5P59047 1200 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 ERVK-9P63128 1117 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 ERVK-24P63145 666 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 RESTQ13127 1097 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 NR5A1Q13285 461 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 TKFCQ3LXA3 575 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 USH1GQ495M9 461 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 PPP1R18Q6NYC8 613 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 USP17L6PQ6QN14 398 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 SAMD1Q6SPF0 538 aaPredicted RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 BLIDQ8IZY5 108 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 SAMD3Q8N6K7 520 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 GTF3C2Q8WUA4 911 aaPredicted RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 CRYGNQ8WXF5 182 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 TRERF1Q96PN7 1200 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 TEX13BQ9BXU2 312 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 FOXP1Q9H334 677 aaPredicted RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 PSTPIP2Q9H939 334 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 MAP3K20Q9NYL2 800 aaKnown RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 CHMP5Q9NZZ3 219 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 DAXXQ9UER7 740 aaPredicted RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 PNMA3Q9UL41 463 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 CCPG1Q9ULG6 757 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 ISY1Q9ULR0 285 aaKnown RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 PCDHA4Q9UN74 947 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 MRPL11Q9Y3B7 192 aaKnown RBP7.22□□□□□ -1.25
RACK1-220ENST00000508963 KIF3AQ9Y496 699 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 ABCB11O95342 1321 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 PARP14Q460N5 1801 aa7.22□□□□□ -1.25
RACK1-220ENST00000508963 NFIBO00712 420 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 SLC25A27O95847 323 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 ALDH1A1P00352 501 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 F13A1P00488 732 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 ALAS1P13196 640 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 XBP1P17861 261 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 ERCC3P19447 782 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 CALML3P27482 149 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 GNA11P29992 359 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 TOB1P50616 345 aaPredicted RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 MRPL12P52815 198 aaKnown RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 FOSBP53539 338 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 NUCB2P80303 420 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 CRHR2Q13324 411 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 TAF1CQ15572 869 aaPredicted RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 SNRNP48Q6IEG0 339 aaKnown RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 CLEC17AQ6ZS10 378 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 DIS3L2Q8IYB7 885 aaKnown RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 ANKRD13CQ8N6S4 541 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 SHCBP1Q8NEM2 672 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 CHST13Q8NET6 341 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 GPRC5AQ8NFJ5 357 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 CCDC148Q8NFR7 591 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 CCDC12Q8WUD4 166 aaPredicted RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 PARK7Q99497 189 aaKnown RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 PORCNQ9H237 461 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 ZSCAN16Q9H4T2 348 aaPredicted RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 C6orf50Q9HD87 102 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 TMEM260Q9NX78 707 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 RNF186Q9NXI6 227 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 COL20A1Q9P218 1284 aa7.21□□□□□ -1.26
RACK1-220ENST00000508963 BIN2Q9UBW5 565 aaPredicted RBP7.21□□□□□ -1.26
RACK1-220ENST00000508963 DNAJC25-GNG10A0A024R161 153 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 FAM205CA6NFA0 338 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 H3BQV1 296 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 WNT7AO00755 349 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 CTGFP29279 349 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 KRT2P35908 639 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 ADCY7P51828 1080 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 RPS6P62753 249 aaKnown RBP7.2□□□□□ -1.26
RACK1-220ENST00000508963 CAP1Q01518 475 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 GRM1Q13255 1194 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 BAATQ14032 418 aaPredicted RBP7.2□□□□□ -1.26
RACK1-220ENST00000508963 TRIM29Q14134 588 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 PLS1Q14651 629 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 UBE2SQ16763 222 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 FAM110CQ1W6H9 321 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 IFFO2Q5TF58 517 aa7.2□□□□□ -1.26
RACK1-220ENST00000508963 FAM173BQ6P4H8 233 aa7.2□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms