RNA–Protein interactions for RNA: ENST00000508736.1

PRPF40B-203, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 5

Gene PRPF40B, Length 1,861 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-203ENST00000508736 CACNB3P54284 484 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 TCP10Q12799 353 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 DPYDQ12882 1025 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 SPATA1Q5VX52 437 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 TMEM179Q6ZVK1 233 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 RASGRP2Q7LDG7 609 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 HOMER1Q86YM7 354 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 MTMR14Q8NCE2 650 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 ERO1AQ96HE7 468 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 PRMT6Q96LA8 375 aaPredicted RBP13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 CTAGE1Q96RT6 745 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 TRIM34Q9BYJ4 488 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 TDRD3Q9H7E2 651 aaKnown RBP13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 RNF181Q9P0P0 153 aa13.06□□□□□ -0.32
PRPF40B-203ENST00000508736 PHLPP2Q6ZVD8 1323 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 A0A087X0B3 334 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 SMCO2A6NFE2 343 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 SPDYE2BA6NHP3 402 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 TMEM232C9JQI7 657 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 MPHOSPH10O00566 681 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 RAD17O75943 681 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 SLU7O95391 586 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 SPDYE6P0CI01 402 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 PRPHP41219 470 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 MMP14P50281 582 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 TBX2Q13207 712 aaPredicted RBP13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 FKBP1CQ5VVH2 108 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 TRMT44Q8IYL2 757 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 AGBL3Q8NEM8 1001 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 MTMR8Q96EF0 704 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 RMND1Q9NWS8 449 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 TMOD2Q9NZR1 351 aa13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 HERC5Q9UII4 1024 aaKnown RBP13.05□□□□□ -0.32
PRPF40B-203ENST00000508736 COL4A5P29400 1685 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 PNMA6FA0A0J9YX94 578 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 PSMD14O00487 310 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 MCM7P33993 719 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 FILIP1LQ4L180 1135 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 C9orf131Q5VYM1 1079 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 ZSCAN29Q8IWY8 852 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 OGFOD1Q8N543 542 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 DCAF4Q8WV16 495 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 CPVLQ9H3G5 476 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 INTS13Q9NVM9 706 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 A0A1B0GTH6 734 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 GTPBP6O43824 516 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 STX10O60499 249 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 EIF6P56537 245 aaKnown RBP13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 NONOQ15233 471 aaKnown RBP eCLIP13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 CLEC10AQ8IUN9 316 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 RASGRP4Q8TDF6 673 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 BAG1Q99933 345 aaPredicted RBP13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 UBA5Q9GZZ9 404 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 JMJD4Q9H9V9 463 aa13.04□□□□□ -0.32
PRPF40B-203ENST00000508736 FRMPD2Q68DX3 1309 aaPredicted RBP13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 MYH4Q9Y623 1939 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 ETF1P62495 437 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 CUL4BQ13620 913 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 DLGAP5Q15398 846 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 E2F4Q16254 413 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 HSP90AA4PQ58FG1 418 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 SYT10Q6XYQ8 523 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 REXO1Q8N1G1 1221 aaKnown RBP13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 GMCL1P1Q8NEA9 526 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 FAM151AQ8WW52 585 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 L2HGDHQ9H9P8 463 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 VAT1LQ9HCJ6 419 aa13.03□□□□□ -0.32
PRPF40B-203ENST00000508736 ZBTB5O15062 677 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 EEF2P13639 858 aaKnown RBP13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 CXCL9Q07325 125 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 INF2Q27J81 1249 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 ABCB5Q2M3G0 1257 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 SPDYE2Q495Y8 402 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 KLHL10Q6JEL2 608 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 ADGRF4Q8IZF3 695 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 ANKRD20A12PQ8NF67 263 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 CSRNP1Q96S65 589 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 FEZ1Q99689 392 aa13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 SAMSN1Q9NSI8 373 aaKnown RBP13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 ZNF215Q9UL58 517 aaPredicted RBP13.02□□□□□ -0.32
PRPF40B-203ENST00000508736 FZD9O00144 591 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 ICA1Q05084 483 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 SPAG1Q07617 926 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 SEMA3FQ13275 785 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 NR1I3Q14994 352 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 TNIP1Q15025 636 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 IL17AQ16552 155 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 CDKAL1Q5VV42 579 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 PDXDC2PQ6P474 469 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 DTHD1Q6ZMT9 781 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 NEK8Q86SG6 692 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 PPFIBP1Q86W92 1011 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 SIAH1Q8IUQ4 282 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 GMCL1Q96IK5 515 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 AK8Q96MA6 479 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 ARID3AQ99856 593 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 SRRTQ9BXP5 876 aaKnown RBP13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 GLT8D2Q9H1C3 349 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 GPCPD1Q9NPB8 672 aa13.02□□□□□ -0.33
PRPF40B-203ENST00000508736 ZNF70Q9UC06 446 aaPredicted RBP13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms