RNA–Protein interactions for RNA: ENST00000508641.1

SH3TC1-216, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 4

Gene SH3TC1, Length 551 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-216ENST00000508641 RPS6KB1P23443 525 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 CNGA1P29973 690 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 CCND3P30281 292 aaPredicted RBP17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 KIF5BP33176 963 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 CNTN2Q02246 1040 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 PRAMEF19Q5SWL8 479 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 MAP3K21Q5TCX8 1036 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 SGMS1Q86VZ5 419 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 MICU3Q86XE3 530 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 FBXO11Q86XK2 927 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 HOMER1Q86YM7 354 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 PIGSQ96S52 555 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 MAP3K14Q99558 947 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 BRPF3Q9ULD4 1205 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 DIS3Q9Y2L1 958 aaKnown RBP17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 MYH6P13533 1939 aa17.06■□□□□ 0.32
SH3TC1-216ENST00000508641 KLF18A0A0U1RQI7 1052 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 CYTH3O43739 400 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 IGHA2P01877 340 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 TFRCP02786 760 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 BAATQ14032 418 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 APOA5Q6Q788 366 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 CMTR1Q8N1G2 835 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 FANCBQ8NB91 859 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 TRPV1Q8NER1 839 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 U2AF1L4Q8WU68 220 aaKnown RBP17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 CLEC4DQ8WXI8 215 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 TINF2Q9BSI4 451 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 RIOX1Q9H6W3 641 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 PAK6Q9NQU5 681 aaPredicted RBP17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 CYP39A1Q9NYL5 469 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 BRCA2P51587 3418 aa17.05■□□□□ 0.32
SH3TC1-216ENST00000508641 PFASO15067 1338 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 PTPDC1A2A3K4 754 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 ZBTB5O15062 677 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 ZBTB43O43298 467 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 EIF5BO60841 1220 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 PLEKHA8P1O95397 391 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 SGPL1O95470 568 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 GJA8P48165 433 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 APOBRQ0VD83 1088 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 RUFY3Q7L099 469 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 CCDC82Q8N4S0 544 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 BRF1Q92994 677 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 MTMR8Q96EF0 704 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 PURBQ96QR8 312 aaKnown RBP17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 AMNQ9BXJ7 453 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 ZSWIM6Q9HCJ5 1215 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 CYP46A1Q9Y6A2 500 aa17.04■□□□□ 0.32
SH3TC1-216ENST00000508641 ABCB11O95342 1321 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 SOWAHBA6NEL2 793 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 PPP1R11O60927 126 aaPredicted RBP17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 CALML3P27482 149 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 RGS19P49795 217 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 GNAQP50148 359 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 RNF207Q6ZRF8 634 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 SRBD1Q8N5C6 995 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 FAM133AQ8N9E0 248 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 FGD4Q96M96 766 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 LZTS2Q9BRK4 669 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 UPF3BQ9BZI7 483 aaKnown RBP17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 PCDHA1Q9Y5I3 950 aa17.03■□□□□ 0.32
SH3TC1-216ENST00000508641 RBBP6Q7Z6E9 1792 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 PNMA6FA0A0J9YX94 578 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 CYBAP13498 195 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 C8orf34Q49A92 452 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 SLC30A10Q6XR72 485 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 TBC1D5Q92609 795 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 SHISA4Q96DD7 197 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 SPZ1Q9BXG8 430 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 TM6SF1Q9BZW5 370 aa17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 MRPL11Q9Y3B7 192 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 DDX49Q9Y6V7 483 aaKnown RBP17.02■□□□□ 0.32
SH3TC1-216ENST00000508641 GOLGA8AA7E2F4 631 aa17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 GOLGA8BA8MQT2 603 aa17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 SNAI1O95863 264 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 RPS6P62753 249 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 RTN1Q16799 776 aa17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 MAMDC4Q6UXC1 1216 aa17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 ZNF467Q7Z7K2 595 aaPredicted RBP17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 RRP36Q96EU6 259 aaKnown RBP17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 CNPY2Q9Y2B0 182 aa17.01■□□□□ 0.31
SH3TC1-216ENST00000508641 hCG_1642624A0A1W2PR95 340 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 SMARCA1P28370 1054 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 ANO1Q5XXA6 986 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 LHX8Q68G74 356 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 TMTC3Q6ZXV5 915 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 ARMCX2Q7L311 632 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 MCF2L2Q86YR7 1114 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 MSL3Q8N5Y2 521 aaKnown RBP17■□□□□ 0.31
SH3TC1-216ENST00000508641 RGS22Q8NE09 1264 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 LARP6Q9BRS8 491 aaKnown RBP17■□□□□ 0.31
SH3TC1-216ENST00000508641 CRISPLD2Q9H0B8 497 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 PDRG1Q9NUG6 133 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 CDKN2AIPQ9NXV6 580 aaPredicted RBP17■□□□□ 0.31
SH3TC1-216ENST00000508641 SEC63Q9UGP8 760 aaKnown RBP17■□□□□ 0.31
SH3TC1-216ENST00000508641 MCM3APO60318 1980 aa17■□□□□ 0.31
SH3TC1-216ENST00000508641 ASTN1O14525 1302 aa16.99■□□□□ 0.31
SH3TC1-216ENST00000508641 SYNGAP1Q96PV0 1343 aa16.99■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms