RNA–Protein interactions for RNA: ENST00000506963.1

SFXN1-205, Transcript of sideroflexin 1, humanhuman

TSL 3

Gene SFXN1, Length 796 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN1-205ENST00000506963 FBXO11Q86XK2 927 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 RAB11FIP4Q86YS3 637 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 TEX2Q8IWB9 1127 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 CCDC144CPQ8IYA2 1237 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 SAMD3Q8N6K7 520 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 CLEC4DQ8WXI8 215 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 RRP36Q96EU6 259 aaKnown RBP11.28□□□□□ -0.6
SFXN1-205ENST00000506963 TRERF1Q96PN7 1200 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 PIGSQ96S52 555 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 VAT1LQ9HCJ6 419 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 RBM27Q9P2N5 1060 aaKnown RBP11.28□□□□□ -0.6
SFXN1-205ENST00000506963 TPCN1Q9ULQ1 816 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 GABRQQ9UN88 632 aa11.28□□□□□ -0.6
SFXN1-205ENST00000506963 DIS3Q9Y2L1 958 aaKnown RBP11.28□□□□□ -0.6
SFXN1-205ENST00000506963 hCG_1984214I3L0E3 225 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 ALAS1P13196 640 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 IFNAR1P17181 557 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 ADORA2AP29274 412 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 ADD1P35611 737 aaKnown RBP11.27□□□□□ -0.61
SFXN1-205ENST00000506963 TRMT44Q8IYL2 757 aaKnown RBP11.27□□□□□ -0.61
SFXN1-205ENST00000506963 ZNF713Q8N859 430 aaPredicted RBP11.27□□□□□ -0.61
SFXN1-205ENST00000506963 MMP19Q99542 508 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 APBA2Q99767 749 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 A1CFQ9NQ94 594 aaKnown RBP11.27□□□□□ -0.61
SFXN1-205ENST00000506963 SLC5A4Q9NY91 659 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 MAP3K20Q9NYL2 800 aaKnown RBP11.27□□□□□ -0.61
SFXN1-205ENST00000506963 PTCH2Q9Y6C5 1203 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 PFASO15067 1338 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 PLXNA1Q9UIW2 1896 aa11.27□□□□□ -0.61
SFXN1-205ENST00000506963 RBBP6Q7Z6E9 1792 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 LOC102724159A0A0B4J2E5 919 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 PRPF3O43395 683 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 PWP2Q15269 919 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 ZNF792Q3KQV3 632 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 MUM1L1Q5H9M0 696 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 COL13A1Q5TAT6 717 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 WDR78Q5VTH9 848 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 OLFML2BQ68BL8 750 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 ZNF467Q7Z7K2 595 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 CMTR1Q8N1G2 835 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 MSL3Q8N5Y2 521 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 FAM133AQ8N9E0 248 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 SLAIN1Q8ND83 568 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 RAET1EQ8TD07 263 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 ARMC5Q96C12 935 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 RNF26Q9BY78 433 aaPredicted RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 MCOLN1Q9GZU1 580 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 CWC22Q9HCG8 908 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 CYP39A1Q9NYL5 469 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 SEC63Q9UGP8 760 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 LIMCH1Q9UPQ0 1083 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 MRPL11Q9Y3B7 192 aaKnown RBP11.26□□□□□ -0.61
SFXN1-205ENST00000506963 PCDHA1Q9Y5I3 950 aa11.26□□□□□ -0.61
SFXN1-205ENST00000506963 LCTP09848 1927 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 NFIBO00712 420 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 OPLAHO14841 1288 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 ADCY3O60266 1144 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 ST18O60284 1047 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 COBLO75128 1261 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 CCT2P78371 535 aaKnown RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 SCRN1Q12765 414 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 ME3Q16798 604 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 CPLX2Q6PUV4 134 aaKnown RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 HOMER1Q86YM7 354 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 MCF2L2Q86YR7 1114 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 FAM177A1Q8N128 213 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 ANKRD35Q8N283 1001 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 ZSCAN31Q96LW9 406 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 SLKQ9H2G2 1235 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 NCOA5Q9HCD5 579 aaKnown RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 HOMER2Q9NSB8 354 aa11.25□□□□□ -0.61
SFXN1-205ENST00000506963 NAP1L2Q9ULW6 460 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 V9GY48 417 aaPredicted RBP11.25□□□□□ -0.61
SFXN1-205ENST00000506963 CDKL5O76039 1030 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 ECM2O94769 699 aaPredicted RBP11.24□□□□□ -0.61
SFXN1-205ENST00000506963 CYP2B6P20813 491 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 GRK4P32298 578 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 MCM2P49736 904 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 HSD17B4P51659 736 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 PKN1Q16512 942 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 PFKFB3Q16875 520 aaPredicted RBP11.24□□□□□ -0.61
SFXN1-205ENST00000506963 USH1GQ495M9 461 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 MAP3K21Q5TCX8 1036 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 PPP1R18Q6NYC8 613 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 MAMDC4Q6UXC1 1216 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 RNF207Q6ZRF8 634 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 DPP9Q86TI2 863 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 NPLOC4Q8TAT6 608 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 TRIB2Q92519 343 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 GTF3C6Q969F1 213 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 DDX11Q96FC9 970 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 MAML3Q96JK9 1138 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 FGD4Q96M96 766 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 LARP6Q9BRS8 491 aaKnown RBP11.24□□□□□ -0.61
SFXN1-205ENST00000506963 SH2B1Q9NRF2 756 aaPredicted RBP11.24□□□□□ -0.61
SFXN1-205ENST00000506963 STK36Q9NRP7 1315 aa11.24□□□□□ -0.61
SFXN1-205ENST00000506963 POTEB2H3BUK9 544 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 PIK3CDO00329 1044 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 CPLX1O14810 134 aa11.23□□□□□ -0.61
SFXN1-205ENST00000506963 LARGE1O95461 756 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms