RNA–Protein interactions for RNA: ENST00000506767.1

TCOF1-210, Transcript of treacle ribosome biogenesis factor 1, humanhuman

TSL 5

Gene TCOF1, Length 869 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-210ENST00000506767 TRAF1Q13077 416 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 ARHGEF6Q15052 776 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 PKN1Q16512 942 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 USH1GQ495M9 461 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 MUM1L1Q5H9M0 696 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 MORN1Q5T089 497 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 ABRAQ8N0Z2 381 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 CLEC4DQ8WXI8 215 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 PIBF1Q8WXW3 757 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 USP6NLQ92738 828 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 PHKBQ93100 1093 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 MAF1Q9H063 256 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 ACAD9Q9H845 621 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 RNF146Q9NTX7 359 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 RBM27Q9P2N5 1060 aaKnown RBP14.86□□□□□ -0.03
TCOF1-210ENST00000506767 SEC63Q9UGP8 760 aaKnown RBP14.86□□□□□ -0.03
TCOF1-210ENST00000506767 PCDHA1Q9Y5I3 950 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 ZNF236Q9UL36 1845 aa14.86□□□□□ -0.03
TCOF1-210ENST00000506767 DOCK3Q8IZD9 2030 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 SLC15A5A6NIM6 579 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 CDKL5O76039 1030 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 SLC4A3P48751 1232 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 GRB14Q14449 540 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 PFKFB3Q16875 520 aaPredicted RBP14.85□□□□□ -0.03
TCOF1-210ENST00000506767 CPLX2Q6PUV4 134 aaKnown RBP14.85□□□□□ -0.03
TCOF1-210ENST00000506767 OTOP1Q7RTM1 612 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 CCAR1Q8IX12 1150 aaKnown RBP14.85□□□□□ -0.03
TCOF1-210ENST00000506767 RGS22Q8NE09 1264 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 NSUN7Q8NE18 718 aaKnown RBP14.85□□□□□ -0.03
TCOF1-210ENST00000506767 SNX21Q969T3 373 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 COA7Q96BR5 231 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 TMX3Q96JJ7 454 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 MCOLN1Q9GZU1 580 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 HOMER2Q9NSB8 354 aa14.85□□□□□ -0.03
TCOF1-210ENST00000506767 ZNFX1Q9P2E3 1918 aaKnown RBP14.85□□□□□ -0.03
TCOF1-210ENST00000506767 hCG_1984214I3L0E3 225 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 NFIBO00712 420 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 OPLAHO14841 1288 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 ECM2O94769 699 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-210ENST00000506767 FCER1AP12319 257 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 HOXD10P28358 340 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 PRMT2P55345 433 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 GHRHRQ02643 423 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 SSRP1Q08945 709 aaKnown RBP14.84□□□□□ -0.03
TCOF1-210ENST00000506767 WDR78Q5VTH9 848 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 ZNF713Q8N859 430 aaPredicted RBP14.84□□□□□ -0.03
TCOF1-210ENST00000506767 MMP19Q99542 508 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 LLPHQ9BRT6 129 aaKnown RBP14.84□□□□□ -0.03
TCOF1-210ENST00000506767 SLC26A6Q9BXS9 759 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 SRRDQ9UH36 339 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 GABRQQ9UN88 632 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 MRPL11Q9Y3B7 192 aaKnown RBP14.84□□□□□ -0.03
TCOF1-210ENST00000506767 IVNS1ABPQ9Y6Y0 642 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 STK36Q9NRP7 1315 aa14.84□□□□□ -0.03
TCOF1-210ENST00000506767 DNAJC25-GNG10A0A024R161 153 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 PPFIA3O75145 1194 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 SCG2P13521 617 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 FDPSP14324 419 aaKnown RBP14.83□□□□□ -0.04
TCOF1-210ENST00000506767 MAP2K5Q13163 448 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 KCTD2Q14681 263 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 WWC2Q6AWC2 1192 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 CCDC83Q8IWF9 413 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 TRIM22Q8IYM9 498 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 SMARCC2Q8TAQ2 1214 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 SOCS4Q8WXH5 440 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 NUDT12Q9BQG2 462 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 A1CFQ9NQ94 594 aaKnown RBP14.83□□□□□ -0.04
TCOF1-210ENST00000506767 TRIM17Q9Y577 477 aa14.83□□□□□ -0.04
TCOF1-210ENST00000506767 RBBP6Q7Z6E9 1792 aaKnown RBP14.83□□□□□ -0.04
TCOF1-210ENST00000506767 STXBP3O00186 592 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 DEXIO95424 95 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 HOXC6P09630 235 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 ADORA2AP29274 412 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 FLT3LGP49771 235 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 AKAP17AQ02040 695 aaKnown RBP14.82□□□□□ -0.04
TCOF1-210ENST00000506767 PRKCZQ05513 592 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 IRF5Q13568 498 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 TYW1BQ6NUM6 668 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 CTU1Q7Z7A3 348 aaKnown RBP14.82□□□□□ -0.04
TCOF1-210ENST00000506767 ANKRD35Q8N283 1001 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 SAMD3Q8N6K7 520 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 TBC1D5Q92609 795 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 GPKOWQ92917 476 aaPredicted RBP eCLIP14.82□□□□□ -0.04
TCOF1-210ENST00000506767 CWC22Q9HCG8 908 aaKnown RBP14.82□□□□□ -0.04
TCOF1-210ENST00000506767 BARHL2Q9NY43 387 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 MAP3K20Q9NYL2 800 aaKnown RBP14.82□□□□□ -0.04
TCOF1-210ENST00000506767 CYP39A1Q9NYL5 469 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 PFASO15067 1338 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 LCTP09848 1927 aa14.82□□□□□ -0.04
TCOF1-210ENST00000506767 PTPDC1A2A3K4 754 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 JAK2O60674 1132 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 DTNBO60941 627 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 COBLO75128 1261 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 XRCC5P13010 732 aaKnown RBP14.81□□□□□ -0.04
TCOF1-210ENST00000506767 RGS2P41220 211 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 CUL4AQ13619 759 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 BAATQ14032 418 aaPredicted RBP14.81□□□□□ -0.04
TCOF1-210ENST00000506767 ZNF792Q3KQV3 632 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 PPP1R18Q6NYC8 613 aa14.81□□□□□ -0.04
TCOF1-210ENST00000506767 NSMFQ6X4W1 530 aa14.81□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms