RNA–Protein interactions for RNA: ENST00000506617.1

DSP-203, Transcript of desmoplakin, humanhuman

TSL 3

Gene DSP, Length 754 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DSP-203ENST00000506617 AGBL1Q96MI9 1066 aa17.17■□□□□ 0.34
DSP-203ENST00000506617 RNF208Q9H0X6 261 aa17.17■□□□□ 0.34
DSP-203ENST00000506617 SH2B1Q9NRF2 756 aaPredicted RBP17.17■□□□□ 0.34
DSP-203ENST00000506617 TPCN1Q9ULQ1 816 aa17.17■□□□□ 0.34
DSP-203ENST00000506617 LCTP09848 1927 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 GOLGA8BA8MQT2 603 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 KLRF2D3W0D1 207 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 PFKFB2O60825 505 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 TAL1P17542 331 aaPredicted RBP17.16■□□□□ 0.34
DSP-203ENST00000506617 RGS19P49795 217 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 METAP2P50579 478 aaKnown RBP eCLIP17.16■□□□□ 0.34
DSP-203ENST00000506617 RTN1Q16799 776 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 NUP133Q8WUM0 1156 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 SNX21Q969T3 373 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 SPZ1Q9BXG8 430 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 CPVLQ9H3G5 476 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 HOMER2Q9NSB8 354 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 MCM3APO60318 1980 aa17.16■□□□□ 0.34
DSP-203ENST00000506617 GOLGA8AA7E2F4 631 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 PGK2P07205 417 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 PRKAR2AP13861 404 aaKnown RBP17.15■□□□□ 0.34
DSP-203ENST00000506617 EN2P19622 333 aaPredicted RBP17.15■□□□□ 0.34
DSP-203ENST00000506617 MAP3K21Q5TCX8 1036 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 MICU3Q86XE3 530 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 CHST13Q8NET6 341 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 UBA5Q9GZZ9 404 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.15■□□□□ 0.34
DSP-203ENST00000506617 RIOX1Q9H6W3 641 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 RNF146Q9NTX7 359 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 FBXO40Q9UH90 709 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 CCPG1Q9ULG6 757 aa17.15■□□□□ 0.34
DSP-203ENST00000506617 BAZ2BQ9UIF8 2168 aaKnown RBP17.15■□□□□ 0.34
DSP-203ENST00000506617 ICAM1P05362 532 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 GJB1P08034 283 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 ALAS1P13196 640 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 CACNB2Q08289 660 aaPredicted RBP17.14■□□□□ 0.33
DSP-203ENST00000506617 TRAF1Q13077 416 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 TMTC3Q6ZXV5 915 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 DHX30Q7L2E3 1194 aaKnown RBP eCLIP17.14■□□□□ 0.33
DSP-203ENST00000506617 SHISA4Q96DD7 197 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 MTMR8Q96EF0 704 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 MAML3Q96JK9 1138 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 ACAD9Q9H845 621 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 PAK6Q9NQU5 681 aaPredicted RBP17.14■□□□□ 0.33
DSP-203ENST00000506617 FAM217BQ9NTX9 383 aaPredicted RBP17.14■□□□□ 0.33
DSP-203ENST00000506617 SLC5A4Q9NY91 659 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 RBM27Q9P2N5 1060 aaKnown RBP17.14■□□□□ 0.33
DSP-203ENST00000506617 RPTORQ8N122 1335 aa17.14■□□□□ 0.33
DSP-203ENST00000506617 CYP2C19P33261 490 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 ZNF792Q3KQV3 632 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 TKFCQ3LXA3 575 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 MFSD14CQ5VZR4 134 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 OLFML2BQ68BL8 750 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 CPLX2Q6PUV4 134 aaKnown RBP17.13■□□□□ 0.33
DSP-203ENST00000506617 STAG2Q8N3U4 1231 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 DDX11Q96FC9 970 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 TRERF1Q96PN7 1200 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 MYL10Q9BUA6 226 aa17.13■□□□□ 0.33
DSP-203ENST00000506617 SLKQ9H2G2 1235 aaPredicted RBP17.13■□□□□ 0.33
DSP-203ENST00000506617 HMX1Q9NP08 348 aaPredicted RBP17.13■□□□□ 0.33
DSP-203ENST00000506617 CDKL5O76039 1030 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 IGHA2P01877 340 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 IFNAR1P17181 557 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 CCND3P30281 292 aaPredicted RBP17.12■□□□□ 0.33
DSP-203ENST00000506617 GJA8P48165 433 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 FUT2Q10981 343 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 CDC37Q16543 378 aaPredicted RBP17.12■□□□□ 0.33
DSP-203ENST00000506617 ME3Q16798 604 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 MUM1L1Q5H9M0 696 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 ADGRF4Q8IZF3 695 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 ANKRD35Q8N283 1001 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 U2AF1L4Q8WU68 220 aaKnown RBP17.12■□□□□ 0.33
DSP-203ENST00000506617 GTF3C6Q969F1 213 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 DEFB118Q96PH6 123 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 LLPHQ9BRT6 129 aaKnown RBP17.12■□□□□ 0.33
DSP-203ENST00000506617 MAF1Q9H063 256 aa17.12■□□□□ 0.33
DSP-203ENST00000506617 DNAJC25-GNG10A0A024R161 153 aa17.11■□□□□ 0.33
DSP-203ENST00000506617 CDC27P30260 824 aa17.11■□□□□ 0.33
DSP-203ENST00000506617 ADD1P35611 737 aaKnown RBP17.11■□□□□ 0.33
DSP-203ENST00000506617 NTRK3Q16288 839 aa17.11■□□□□ 0.33
DSP-203ENST00000506617 TEX2Q8IWB9 1127 aa17.11■□□□□ 0.33
DSP-203ENST00000506617 SRBD1Q8N5C6 995 aaKnown RBP17.11■□□□□ 0.33
DSP-203ENST00000506617 JMJD4Q9H9V9 463 aa17.11■□□□□ 0.33
DSP-203ENST00000506617 A1CFQ9NQ94 594 aaKnown RBP17.11■□□□□ 0.33
DSP-203ENST00000506617 NAP1L2Q9ULW6 460 aaPredicted RBP17.11■□□□□ 0.33
DSP-203ENST00000506617 DIS3Q9Y2L1 958 aaKnown RBP17.11■□□□□ 0.33
DSP-203ENST00000506617 LRRC37A2A6NM11 1700 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 CPLX1O14810 134 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 CYTH3O43739 400 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 SGPL1O95470 568 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 CYBAP13498 195 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 RXRAP19793 462 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 MLLT1Q03111 559 aaPredicted RBP17.1■□□□□ 0.33
DSP-203ENST00000506617 SCRN1Q12765 414 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 FAM177A1Q8N128 213 aaPredicted RBP17.1■□□□□ 0.33
DSP-203ENST00000506617 FGD4Q96M96 766 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 RNF26Q9BY78 433 aaPredicted RBP17.1■□□□□ 0.33
DSP-203ENST00000506617 VAT1LQ9HCJ6 419 aa17.1■□□□□ 0.33
DSP-203ENST00000506617 PNMA6FA0A0J9YX94 578 aa17.09■□□□□ 0.33
DSP-203ENST00000506617 ZBTB5O15062 677 aa17.09■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms