RNA–Protein interactions for RNA: ENST00000506515.1

HERC4-213, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 4

Gene HERC4, Length 540 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-213ENST00000506515 NDOR1Q9UHB4 597 aa8.51□□□□□ -1.05
HERC4-213ENST00000506515 COBLO75128 1261 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 C6orf222P0C671 652 aaPredicted RBP8.5□□□□□ -1.05
HERC4-213ENST00000506515 TEKQ02763 1124 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 NTRK3Q16288 839 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 RNF187Q5TA31 235 aaPredicted RBP8.5□□□□□ -1.05
HERC4-213ENST00000506515 DENND5AQ6IQ26 1287 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 WAPLQ7Z5K2 1190 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 PPIL6Q8IXY8 311 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 KREMEN2Q8NCW0 462 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 FRS2Q8WU20 508 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 MISP3Q96FF7 219 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 CLUHP3Q96NS8 147 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 CLEC1BQ9P126 229 aa8.5□□□□□ -1.05
HERC4-213ENST00000506515 TMEM82A0PJX8 343 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 PLS3P13797 630 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 NCLP19338 710 aaKnown RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 EEF1DP3Q658K8 133 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 RCSD1Q6JBY9 416 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 INTS5Q6P9B9 1019 aaKnown RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 DHX37Q8IY37 1157 aaKnown RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 NAT16Q8N8M0 369 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 NPLOC4Q8TAT6 608 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 BCL7CQ8WUZ0 217 aaPredicted RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 MRPL4Q9BYD3 311 aaKnown RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 CARS2Q9HA77 564 aaKnown RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 SFMBT1Q9UHJ3 866 aa8.49□□□□□ -1.05
HERC4-213ENST00000506515 TMEFF2Q9UIK5 374 aaPredicted RBP8.49□□□□□ -1.05
HERC4-213ENST00000506515 IRS4O14654 1257 aaPredicted RBP8.48□□□□□ -1.05
HERC4-213ENST00000506515 MEFVO15553 781 aaPredicted RBP8.48□□□□□ -1.05
HERC4-213ENST00000506515 SSTR4P31391 388 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 GABREP78334 506 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 FNDC3BQ53EP0 1204 aaKnown RBP8.48□□□□□ -1.05
HERC4-213ENST00000506515 FILIP1Q7Z7B0 1213 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 NIM1KQ8IY84 436 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 PTPRN2Q92932 1015 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 NINJ1Q92982 152 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 SLC52A2Q9HAB3 445 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 PLAAQ9Y263 795 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 SLC5A6Q9Y289 635 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 TRAF6Q9Y4K3 522 aa8.48□□□□□ -1.05
HERC4-213ENST00000506515 FGF10O15520 208 aaPredicted RBP8.47□□□□□ -1.05
HERC4-213ENST00000506515 MED26O95402 600 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 CD8BP10966 210 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 PAMP19021 973 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 KCNT2Q6UVM3 1135 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 ZNF574Q6ZN55 896 aaPredicted RBP8.47□□□□□ -1.05
HERC4-213ENST00000506515 STK11IPQ8N1F8 1099 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 SLC7A14Q8TBB6 771 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 SYTL4Q96C24 671 aaPredicted RBP8.47□□□□□ -1.05
HERC4-213ENST00000506515 PTCHD1Q96NR3 888 aa8.47□□□□□ -1.05
HERC4-213ENST00000506515 NPHP3-ACAD11A0A0J9YXS1 232 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 RFPL3O75679 317 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 ENDOUP21128 410 aaKnown RBP8.46□□□□□ -1.06
HERC4-213ENST00000506515 ITGB7P26010 798 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 ZP2Q05996 745 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 LAPTM5Q13571 262 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 SPRED2Q7Z698 418 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 CPNE8Q86YQ8 564 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 DCAF4Q8WV16 495 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 IFT57Q9NWB7 429 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 PRKAB1Q9Y478 270 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 ASXL2Q76L83 1435 aa8.46□□□□□ -1.06
HERC4-213ENST00000506515 ARNTLO00327 626 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 DNAJC6O75061 913 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 TBC1D8O95759 1140 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 MASP1P48740 699 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 TRIM61Q5EBN2 209 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 ACBD5Q5T8D3 534 aaPredicted RBP8.45□□□□□ -1.06
HERC4-213ENST00000506515 ANGEL2Q5VTE6 544 aaKnown RBP8.45□□□□□ -1.06
HERC4-213ENST00000506515 STYK1Q6J9G0 422 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 MAMDC2Q7Z304 686 aaPredicted RBP8.45□□□□□ -1.06
HERC4-213ENST00000506515 BRAPQ7Z569 592 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 CCDC103Q8IW40 242 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 DIO2Q92813 273 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 MFSD3Q96ES6 412 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 PHF20Q9BVI0 1012 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 SPC25Q9HBM1 224 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 ERVK13-1Q9NX77 482 aa8.45□□□□□ -1.06
HERC4-213ENST00000506515 EFCAB14O75071 495 aa8.44□□□□□ -1.06
HERC4-213ENST00000506515 LCP1P13796 627 aa8.44□□□□□ -1.06
HERC4-213ENST00000506515 SDSP20132 328 aa8.44□□□□□ -1.06
HERC4-213ENST00000506515 E4F1Q66K89 784 aaPredicted RBP8.44□□□□□ -1.06
HERC4-213ENST00000506515 FCRL2Q96LA5 508 aaPredicted RBP8.44□□□□□ -1.06
HERC4-213ENST00000506515 TRIM39Q9HCM9 518 aa8.44□□□□□ -1.06
HERC4-213ENST00000506515 SLAMF8Q9P0V8 285 aa8.44□□□□□ -1.06
HERC4-213ENST00000506515 CCDC39Q9UFE4 941 aa8.44□□□□□ -1.06
HERC4-213ENST00000506515 TRBV23OR9-2A0A075B6M9 112 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 LOC101059915A0A1B0GWI6 518 aaPredicted RBP8.43□□□□□ -1.06
HERC4-213ENST00000506515 MYCLP1P12525 358 aaPredicted RBP8.43□□□□□ -1.06
HERC4-213ENST00000506515 LTBRP36941 435 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 CD97P48960 835 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 INF2Q27J81 1249 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 TM4SF20Q53R12 229 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 IQCEQ6IPM2 695 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 CNNM4Q6P4Q7 775 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 CYP2R1Q6VVX0 501 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 FGD2Q7Z6J4 655 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 TMEM52Q8NDY8 209 aa8.43□□□□□ -1.06
HERC4-213ENST00000506515 GSTCDQ8NEC7 633 aa8.43□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms