RNA–Protein interactions for RNA: ENST00000506244.5

SNCA-209, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 570 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-209ENST00000506244 NSMFQ6X4W1 530 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 LZTS2Q9BRK4 669 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 JMJD4Q9H9V9 463 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 CNPY2Q9Y2B0 182 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 BRCA2P51587 3418 aa19.4■□□□□ 0.7
SNCA-209ENST00000506244 ZBTB5O15062 677 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 EXOSC10Q01780 885 aaKnown RBP19.39■□□□□ 0.69
SNCA-209ENST00000506244 QRICH1Q2TAL8 776 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 USH1GQ495M9 461 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 MUM1L1Q5H9M0 696 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 FBXO11Q86XK2 927 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 SHISA4Q96DD7 197 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 AMNQ9BXJ7 453 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 USP26Q9BXU7 913 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 LRRC2Q9BYS8 371 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 CYP39A1Q9NYL5 469 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 MYH6P13533 1939 aa19.39■□□□□ 0.69
SNCA-209ENST00000506244 TFRCP02786 760 aaKnown RBP19.38■□□□□ 0.69
SNCA-209ENST00000506244 CNGA1P29973 690 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 CCND3P30281 292 aaPredicted RBP19.38■□□□□ 0.69
SNCA-209ENST00000506244 RCAN1P53805 252 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 MAMDC4Q6UXC1 1216 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 FAM133AQ8N9E0 248 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 ANKLE1Q8NAG6 615 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 SPZ1Q9BXG8 430 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 CRISPLD2Q9H0B8 497 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 RIOX1Q9H6W3 641 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 VAT1LQ9HCJ6 419 aa19.38■□□□□ 0.69
SNCA-209ENST00000506244 GPHNQ9NQX3 736 aaPredicted RBP19.38■□□□□ 0.69
SNCA-209ENST00000506244 MRPL11Q9Y3B7 192 aaKnown RBP19.38■□□□□ 0.69
SNCA-209ENST00000506244 PTPDC1A2A3K4 754 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 ASB14A6NK59 587 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 NFIBO00712 420 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 SMARCA1P28370 1054 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 COL9A3Q14050 684 aaPredicted RBP19.37■□□□□ 0.69
SNCA-209ENST00000506244 APOA5Q6Q788 366 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 MICU3Q86XE3 530 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 MCF2L2Q86YR7 1114 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 MTMR8Q96EF0 704 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 MPHOSPH6Q99547 160 aaKnown RBP19.37■□□□□ 0.69
SNCA-209ENST00000506244 MYL10Q9BUA6 226 aa19.37■□□□□ 0.69
SNCA-209ENST00000506244 ADD3Q9UEY8 706 aaKnown RBP19.37■□□□□ 0.69
SNCA-209ENST00000506244 DDX20Q9UHI6 824 aaKnown RBP19.37■□□□□ 0.69
SNCA-209ENST00000506244 LOC102724159A0A0B4J2E5 919 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 SEPT4O43236 478 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 FARP2O94887 1054 aaPredicted RBP19.36■□□□□ 0.69
SNCA-209ENST00000506244 TAL1P17542 331 aaPredicted RBP19.36■□□□□ 0.69
SNCA-209ENST00000506244 CASTP20810 708 aaKnown RBP19.36■□□□□ 0.69
SNCA-209ENST00000506244 RPS6KB1P23443 525 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 PWP2Q15269 919 aaKnown RBP19.36■□□□□ 0.69
SNCA-209ENST00000506244 RNF207Q6ZRF8 634 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 HOMER1Q86YM7 354 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 RGS22Q8NE09 1264 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 CLEC4DQ8WXI8 215 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 RBM28Q9NW13 759 aaKnown RBP19.36■□□□□ 0.69
SNCA-209ENST00000506244 SEC63Q9UGP8 760 aaKnown RBP19.36■□□□□ 0.69
SNCA-209ENST00000506244 FRMPD3Q5JV73 1810 aa19.36■□□□□ 0.69
SNCA-209ENST00000506244 PNMA6FA0A0J9YX94 578 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 ZBTB43O43298 467 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 CNTN2Q02246 1040 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 ARMCX2Q7L311 632 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 RRP36Q96EU6 259 aaKnown RBP19.35■□□□□ 0.69
SNCA-209ENST00000506244 TCEANC2Q96MN5 208 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 ABHD16BQ9H3Z7 469 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 OGDHLQ9ULD0 1010 aa19.35■□□□□ 0.69
SNCA-209ENST00000506244 KLF18A0A0U1RQI7 1052 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 B4DLN1 442 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 MRPL12P52815 198 aaKnown RBP19.34■□□□□ 0.69
SNCA-209ENST00000506244 BAATQ14032 418 aaPredicted RBP19.34■□□□□ 0.69
SNCA-209ENST00000506244 SLC30A10Q6XR72 485 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 FBXL16Q8N461 479 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 FANCBQ8NB91 859 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 TRPV1Q8NER1 839 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 FGD4Q96M96 766 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 PIGSQ96S52 555 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 TM6SF1Q9BZW5 370 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 CDKN2AIPQ9NXV6 580 aaPredicted RBP19.34■□□□□ 0.69
SNCA-209ENST00000506244 PCDHA1Q9Y5I3 950 aa19.34■□□□□ 0.69
SNCA-209ENST00000506244 CYTH3O43739 400 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 AKR1A1P14550 325 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 RXRAP19793 462 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 CALML3P27482 149 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 ANAPC15P60006 121 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 RPS6P62753 249 aaKnown RBP19.33■□□□□ 0.68
SNCA-209ENST00000506244 PPP2R5BQ15173 497 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 RTN1Q16799 776 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 Q6ZUG5 572 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 RUFY3Q7L099 469 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 CCDC144CPQ8IYA2 1237 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 DNERQ8NFT8 737 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 ZHX1Q9UKY1 873 aaPredicted RBP19.33■□□□□ 0.68
SNCA-209ENST00000506244 CYP46A1Q9Y6A2 500 aa19.33■□□□□ 0.68
SNCA-209ENST00000506244 SMCHD1A6NHR9 2005 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 LCTP09848 1927 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 CCDC196A0A1B0GTZ2 297 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 SOWAHBA6NEL2 793 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 GOLGA8AA7E2F4 631 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 GOLGA8BA8MQT2 603 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 RARBP10826 455 aa19.32■□□□□ 0.68
SNCA-209ENST00000506244 LHX8Q68G74 356 aa19.32■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms