RNA–Protein interactions for RNA: ENST00000505589.1

NEDD9-210, Transcript of neural precursor cell expressed, developmentally down-regulated 9, humanhuman

TSL 2

Gene NEDD9, Length 571 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD9-210ENST00000505589 CYP2D7A0A087X1C5 515 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 B4DLN1 442 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 KPNA6O60684 536 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 TSPY3P0CV98 308 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 TSPY8P0CW00 308 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 MRPL12P52815 198 aaKnown RBP11.79□□□□□ -0.52
NEDD9-210ENST00000505589 IKQ13123 557 aaPredicted RBP11.79□□□□□ -0.52
NEDD9-210ENST00000505589 TLK2Q86UE8 772 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 FAM133AQ8N9E0 248 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 RETREG2Q8NC44 543 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 TRERF1Q96PN7 1200 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 STRBPQ96SI9 672 aaKnown RBP11.79□□□□□ -0.52
NEDD9-210ENST00000505589 SLC9A7Q96T83 725 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.79□□□□□ -0.52
NEDD9-210ENST00000505589 NACAP1Q9BZK3 213 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 VTA1Q9NP79 307 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 MTMR4Q9NYA4 1195 aa11.79□□□□□ -0.52
NEDD9-210ENST00000505589 GNEQ9Y223 722 aaKnown RBP11.79□□□□□ -0.52
NEDD9-210ENST00000505589 APPP05067 770 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 RASA1P20936 1047 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 SLC1A4P43007 532 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 CPT1AP50416 773 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 CCL23P55773 120 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 BEX3Q00994 111 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 SLFN13Q68D06 897 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 KIAA1211Q6ZU35 1233 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 STAG1Q8WVM7 1258 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 GPATCH3Q96I76 525 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 NUP88Q99567 741 aaPredicted RBP11.78□□□□□ -0.52
NEDD9-210ENST00000505589 NOC4LQ9BVI4 516 aaKnown RBP11.78□□□□□ -0.52
NEDD9-210ENST00000505589 PUS7LQ9H0K6 701 aaKnown RBP11.78□□□□□ -0.52
NEDD9-210ENST00000505589 LMCD1Q9NZU5 365 aa11.78□□□□□ -0.52
NEDD9-210ENST00000505589 COL11A1P12107 1806 aaPredicted RBP11.77□□□□□ -0.52
NEDD9-210ENST00000505589 PATL2C9JE40 543 aaKnown RBP11.77□□□□□ -0.53
NEDD9-210ENST00000505589 TMEM232C9JQI7 657 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 NKRFO15226 690 aaKnown RBP eCLIP11.77□□□□□ -0.53
NEDD9-210ENST00000505589 CTAGE5O15320 804 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 B4GALT4O60513 344 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 PARNO95453 639 aaKnown RBP11.77□□□□□ -0.53
NEDD9-210ENST00000505589 RLBP1P12271 317 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 TDO2P48775 406 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 PTPN11Q06124 597 aaPredicted RBP11.77□□□□□ -0.53
NEDD9-210ENST00000505589 TMEM31Q5JXX7 168 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 MICALL1Q8N3F8 863 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 HLA-CQ95604 372 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 LRRCC1Q9C099 1032 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 KATNBL1Q9H079 304 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 BCL11AQ9H165 835 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 HOMER2Q9NSB8 354 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 ISY1Q9ULR0 285 aaKnown RBP11.77□□□□□ -0.53
NEDD9-210ENST00000505589 YBX2Q9Y2T7 364 aaKnown RBP11.77□□□□□ -0.53
NEDD9-210ENST00000505589 RAD50Q92878 1312 aa11.77□□□□□ -0.53
NEDD9-210ENST00000505589 IGKV6D-41A0A0C4DH26 115 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 GSG1L2A8MUP6 293 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 CNTN2Q02246 1040 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 BFSP2Q13515 415 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 DUSP28Q4G0W2 176 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 RCSD1Q6JBY9 416 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 NEDD1Q8NHV4 660 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 APPBP2Q92624 585 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 CEP95Q96GE4 821 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 GMCL1Q96IK5 515 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 TRPV6Q9H1D0 765 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 ALDH8A1Q9H2A2 487 aaPredicted RBP11.76□□□□□ -0.53
NEDD9-210ENST00000505589 A1CFQ9NQ94 594 aaKnown RBP11.76□□□□□ -0.53
NEDD9-210ENST00000505589 RNF146Q9NTX7 359 aa11.76□□□□□ -0.53
NEDD9-210ENST00000505589 PARP14Q460N5 1801 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 C11orf97A0A1B0GVM6 126 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-210ENST00000505589 PITPNM1O00562 1244 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 ADCY6O43306 1168 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 GPR37L1O60883 481 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 BAIAP3O94812 1187 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 ALAS1P13196 640 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 SMPD1P17405 629 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 RABGGTBP53611 331 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 CCDC155Q8N6L0 562 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 KBTBD3Q8NAB2 608 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 FGD4Q96M96 766 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 AGBL1Q96MI9 1066 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 MTG1Q9BT17 334 aaPredicted RBP11.75□□□□□ -0.53
NEDD9-210ENST00000505589 ECHDC1Q9NTX5 307 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 MTCH2Q9Y6C9 303 aa11.75□□□□□ -0.53
NEDD9-210ENST00000505589 SOWAHBA6NEL2 793 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 RNF113AO15541 343 aaKnown RBP11.74□□□□□ -0.53
NEDD9-210ENST00000505589 KCNJ6P48051 423 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 IRX5P78411 483 aaPredicted RBP11.74□□□□□ -0.53
NEDD9-210ENST00000505589 TAPT1Q6NXT6 567 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 NFRKBQ6P4R8 1299 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 IFNL3Q8IZI9 196 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 MORC4Q8TE76 937 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 LRFN3Q9BTN0 628 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 WDR11Q9BZH6 1224 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 FTOQ9C0B1 505 aaKnown RBP eCLIP11.74□□□□□ -0.53
NEDD9-210ENST00000505589 MAF1Q9H063 256 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 ZBTB40Q9NUA8 1239 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 CYP39A1Q9NYL5 469 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 NOD1Q9Y239 953 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 TNKSO95271 1327 aa11.74□□□□□ -0.53
NEDD9-210ENST00000505589 SMIM22K7EJ46 135 aa11.73□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms