RNA–Protein interactions for RNA: ENST00000505054.2

SYNE4-207, Transcript of spectrin repeat containing nuclear envelope family member 4, humanhuman

TSL 3

Gene SYNE4, Length 713 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE4-207ENST00000505054 ZBED4O75132 1171 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 PARP1P09874 1014 aaKnown RBP19.66■□□□□ 0.74
SYNE4-207ENST00000505054 ERCC3P19447 782 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 STAT3P40763 770 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 SNAP25P60880 206 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 ASPRV1Q53RT3 343 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 BLOC1S2Q6QNY1 142 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 RIOX2Q8IUF8 465 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 ZNF654Q8IZM8 581 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 TEX13BQ9BXU2 312 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 RAVER2Q9HCJ3 691 aaKnown RBP19.66■□□□□ 0.74
SYNE4-207ENST00000505054 ZNF536O15090 1300 aa19.66■□□□□ 0.74
SYNE4-207ENST00000505054 EIF5BO60841 1220 aaKnown RBP19.65■□□□□ 0.74
SYNE4-207ENST00000505054 FDX1P10109 184 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 CASTP20810 708 aaKnown RBP19.65■□□□□ 0.74
SYNE4-207ENST00000505054 RPS6KB1P23443 525 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 GRM4Q14833 912 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 SNRNP48Q6IEG0 339 aaKnown RBP19.65■□□□□ 0.74
SYNE4-207ENST00000505054 CATIPQ7Z7H3 387 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 SGMS1Q86VZ5 419 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 CPXCR1Q8N123 301 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 STAG2Q8N3U4 1231 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 ARRDC4Q8NCT1 418 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 MYL10Q9BUA6 226 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 UBA5Q9GZZ9 404 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 RANBP17Q9H2T7 1088 aaKnown RBP19.65■□□□□ 0.74
SYNE4-207ENST00000505054 SLC5A4Q9NY91 659 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 MAD2L2Q9UI95 211 aa19.65■□□□□ 0.74
SYNE4-207ENST00000505054 PALM3A6NDB9 673 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-207ENST00000505054 POTEB2H3BUK9 544 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 DDAH1O94760 285 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 PSMA5P28066 241 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 OAZ1P54368 228 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 GJC2Q5T442 439 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-207ENST00000505054 NFXL1Q6ZNB6 911 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 NCAPG2Q86XI2 1143 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 TMTC2Q8N394 836 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 ATP11BQ9Y2G3 1177 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 RIPK3Q9Y572 518 aa19.64■□□□□ 0.73
SYNE4-207ENST00000505054 CTDP1Q9Y5B0 961 aaPredicted RBP19.64■□□□□ 0.73
SYNE4-207ENST00000505054 CCDC69A6NI79 296 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 SEPT4O43236 478 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 SLC25A27O95847 323 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 SLC35G1Q2M3R5 365 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 CCDC174Q6PII3 467 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 ABRAQ8N0Z2 381 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 GUCD1Q96NT3 240 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 TM6SF1Q9BZW5 370 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 MROH8Q9H579 483 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 ZSWIM6Q9HCJ5 1215 aa19.63■□□□□ 0.73
SYNE4-207ENST00000505054 TAL1P17542 331 aaPredicted RBP19.62■□□□□ 0.73
SYNE4-207ENST00000505054 ANAPC15P60006 121 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 SNX17Q15036 470 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 ZNF697Q5TEC3 545 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 SLC39A5Q6ZMH5 540 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 Q6ZUG5 572 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 RAB11FIP4Q86YS3 637 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 NUP133Q8WUM0 1156 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 IL17RAQ96F46 866 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 AGBL1Q96MI9 1066 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 MAP3K14Q99558 947 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 BRPF3Q9ULD4 1205 aa19.62■□□□□ 0.73
SYNE4-207ENST00000505054 KLRF2D3W0D1 207 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 COBLO75128 1261 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 RXRAP19793 462 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 COPB2P35606 906 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 APOA5Q6Q788 366 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 RUFY3Q7L099 469 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 ADGRF4Q8IZF3 695 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 AGXT2Q9BYV1 514 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 UPF3BQ9BZI7 483 aaKnown RBP19.61■□□□□ 0.73
SYNE4-207ENST00000505054 SLC12A7Q9Y666 1083 aa19.61■□□□□ 0.73
SYNE4-207ENST00000505054 ICAM1P05362 532 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 SLC4A3P48751 1232 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 ANO1Q5XXA6 986 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 MICU3Q86XE3 530 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 PHF6Q8IWS0 365 aaKnown RBP eCLIP19.6■□□□□ 0.73
SYNE4-207ENST00000505054 FBXL16Q8N461 479 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 MAML3Q96JK9 1138 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 JMJD4Q9H9V9 463 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 CYP46A1Q9Y6A2 500 aa19.6■□□□□ 0.73
SYNE4-207ENST00000505054 SMCHD1A6NHR9 2005 aa19.59■□□□□ 0.73
SYNE4-207ENST00000505054 CDC37Q16543 378 aaPredicted RBP19.59■□□□□ 0.73
SYNE4-207ENST00000505054 TRIM60Q495X7 471 aa19.59■□□□□ 0.73
SYNE4-207ENST00000505054 CTCFLQ8NI51 663 aaPredicted RBP19.59■□□□□ 0.73
SYNE4-207ENST00000505054 BRF1Q92994 677 aa19.59■□□□□ 0.73
SYNE4-207ENST00000505054 PRDM5Q9NQX1 630 aaPredicted RBP19.59■□□□□ 0.73
SYNE4-207ENST00000505054 PDLIM7Q9NR12 457 aa19.59■□□□□ 0.73
SYNE4-207ENST00000505054 HOMER2Q9NSB8 354 aa19.59■□□□□ 0.73
SYNE4-207ENST00000505054 CCPG1Q9ULG6 757 aa19.59■□□□□ 0.73
SYNE4-207ENST00000505054 KLF18A0A0U1RQI7 1052 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 CYTH3O43739 400 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 CALM1P0DP23 149 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 CALM2P0DP24 149 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 CALM3P0DP25 149 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 FCER1AP12319 257 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 FGD1P98174 961 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 APOBRQ0VD83 1088 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 LRRC41Q15345 812 aa19.58■□□□□ 0.72
SYNE4-207ENST00000505054 C1orf53Q5VUE5 145 aa19.58■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms