RNA–Protein interactions for RNA: ENST00000504679.5

DDR1-254, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 4

Gene DDR1, Length 460 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-254ENST00000504679 ANKRD35Q8N283 1001 aa21.06■□□□□ 0.96
DDR1-254ENST00000504679 DDX11Q96FC9 970 aa21.06■□□□□ 0.96
DDR1-254ENST00000504679 SLC5A4Q9NY91 659 aa21.06■□□□□ 0.96
DDR1-254ENST00000504679 GABRQQ9UN88 632 aa21.06■□□□□ 0.96
DDR1-254ENST00000504679 PTPN22Q9Y2R2 807 aa21.06■□□□□ 0.96
DDR1-254ENST00000504679 MRPL11Q9Y3B7 192 aaKnown RBP21.06■□□□□ 0.96
DDR1-254ENST00000504679 V9GY48 417 aaPredicted RBP21.06■□□□□ 0.96
DDR1-254ENST00000504679 ABCB11O95342 1321 aa21.05■□□□□ 0.96
DDR1-254ENST00000504679 PFKFB2O60825 505 aa21.05■□□□□ 0.96
DDR1-254ENST00000504679 AKAP17AQ02040 695 aaKnown RBP21.05■□□□□ 0.96
DDR1-254ENST00000504679 PRKCZQ05513 592 aa21.05■□□□□ 0.96
DDR1-254ENST00000504679 GRB14Q14449 540 aa21.05■□□□□ 0.96
DDR1-254ENST00000504679 RAET1EQ8TD07 263 aa21.05■□□□□ 0.96
DDR1-254ENST00000504679 ZSCAN31Q96LW9 406 aaPredicted RBP21.05■□□□□ 0.96
DDR1-254ENST00000504679 NCOA5Q9HCD5 579 aaKnown RBP21.05■□□□□ 0.96
DDR1-254ENST00000504679 PCDHA1Q9Y5I3 950 aa21.05■□□□□ 0.96
DDR1-254ENST00000504679 ZNFX1Q9P2E3 1918 aaKnown RBP21.04■□□□□ 0.96
DDR1-254ENST00000504679 ADORA2AP29274 412 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 RGS2P41220 211 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 FUT2Q10981 343 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 MAP2K5Q13163 448 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 ME3Q16798 604 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 MUM1L1Q5H9M0 696 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 DHX30Q7L2E3 1194 aaKnown RBP eCLIP21.04■□□□□ 0.96
DDR1-254ENST00000504679 RBM27Q9P2N5 1060 aaKnown RBP21.04■□□□□ 0.96
DDR1-254ENST00000504679 ZSWIM8A7E2V4 1837 aa21.04■□□□□ 0.96
DDR1-254ENST00000504679 XRCC5P13010 732 aaKnown RBP21.03■□□□□ 0.96
DDR1-254ENST00000504679 IFNAR1P17181 557 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 CYP2B6P20813 491 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 IRF5Q13568 498 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 NTRK3Q16288 839 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 FBXO46Q6PJ61 603 aaPredicted RBP21.03■□□□□ 0.96
DDR1-254ENST00000504679 MCF2L2Q86YR7 1114 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 RGS22Q8NE09 1264 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 USP6NLQ92738 828 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 MAF1Q9H063 256 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 SMCHD1A6NHR9 2005 aa21.03■□□□□ 0.96
DDR1-254ENST00000504679 PRPF3O43395 683 aaKnown RBP21.02■□□□□ 0.96
DDR1-254ENST00000504679 PPP1R11O60927 126 aaPredicted RBP21.02■□□□□ 0.96
DDR1-254ENST00000504679 CDKL5O76039 1030 aa21.02■□□□□ 0.96
DDR1-254ENST00000504679 MCM2P49736 904 aa21.02■□□□□ 0.96
DDR1-254ENST00000504679 SSRP1Q08945 709 aaKnown RBP21.02■□□□□ 0.96
DDR1-254ENST00000504679 SCRN1Q12765 414 aa21.02■□□□□ 0.96
DDR1-254ENST00000504679 NSMFQ6X4W1 530 aa21.02■□□□□ 0.96
DDR1-254ENST00000504679 TRIM22Q8IYM9 498 aa21.02■□□□□ 0.96
DDR1-254ENST00000504679 CLEC4DQ8WXI8 215 aa21.02■□□□□ 0.96
DDR1-254ENST00000504679 PFASO15067 1338 aa21.02■□□□□ 0.95
DDR1-254ENST00000504679 CNTNAP5Q8WYK1 1306 aa21.02■□□□□ 0.95
DDR1-254ENST00000504679 hCG_1642624A0A1W2PR95 340 aa21.01■□□□□ 0.95
DDR1-254ENST00000504679 HOXC6P09630 235 aa21.01■□□□□ 0.95
DDR1-254ENST00000504679 TAL1P17542 331 aaPredicted RBP21.01■□□□□ 0.95
DDR1-254ENST00000504679 TRMT44Q8IYL2 757 aaKnown RBP21.01■□□□□ 0.95
DDR1-254ENST00000504679 NECAB1Q8N987 351 aa21.01■□□□□ 0.95
DDR1-254ENST00000504679 SLC26A6Q9BXS9 759 aa21.01■□□□□ 0.95
DDR1-254ENST00000504679 RNF26Q9BY78 433 aaPredicted RBP21.01■□□□□ 0.95
DDR1-254ENST00000504679 A1CFQ9NQ94 594 aaKnown RBP21.01■□□□□ 0.95
DDR1-254ENST00000504679 SH2B1Q9NRF2 756 aaPredicted RBP21.01■□□□□ 0.95
DDR1-254ENST00000504679 PLXNB2O15031 1838 aa21■□□□□ 0.95
DDR1-254ENST00000504679 NFIBO00712 420 aa21■□□□□ 0.95
DDR1-254ENST00000504679 ADCY3O60266 1144 aa21■□□□□ 0.95
DDR1-254ENST00000504679 COBLO75128 1261 aa21■□□□□ 0.95
DDR1-254ENST00000504679 PGK2P07205 417 aa21■□□□□ 0.95
DDR1-254ENST00000504679 COL13A1Q5TAT6 717 aaPredicted RBP21■□□□□ 0.95
DDR1-254ENST00000504679 RNF207Q6ZRF8 634 aa21■□□□□ 0.95
DDR1-254ENST00000504679 SAMD3Q8N6K7 520 aa21■□□□□ 0.95
DDR1-254ENST00000504679 PXYLP1Q8TE99 480 aa21■□□□□ 0.95
DDR1-254ENST00000504679 PHKBQ93100 1093 aa21■□□□□ 0.95
DDR1-254ENST00000504679 DIS3Q9Y2L1 958 aaKnown RBP21■□□□□ 0.95
DDR1-254ENST00000504679 PTCH2Q9Y6C5 1203 aa21■□□□□ 0.95
DDR1-254ENST00000504679 PTPDC1A2A3K4 754 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 POTEB2H3BUK9 544 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 BAATQ14032 418 aaPredicted RBP20.99■□□□□ 0.95
DDR1-254ENST00000504679 HEATR3Q7Z4Q2 680 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 SLAIN1Q8ND83 568 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 GTF3C6Q969F1 213 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 APBA2Q99767 749 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 MCOLN1Q9GZU1 580 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 MAP3K20Q9NYL2 800 aaKnown RBP20.99■□□□□ 0.95
DDR1-254ENST00000504679 CYP39A1Q9NYL5 469 aa20.99■□□□□ 0.95
DDR1-254ENST00000504679 DNAJC25-GNG10A0A024R161 153 aa20.98■□□□□ 0.95
DDR1-254ENST00000504679 LARGE1O95461 756 aa20.98■□□□□ 0.95
DDR1-254ENST00000504679 GRK4P32298 578 aa20.98■□□□□ 0.95
DDR1-254ENST00000504679 PFKFB3Q16875 520 aaPredicted RBP20.98■□□□□ 0.95
DDR1-254ENST00000504679 ZNF792Q3KQV3 632 aa20.98■□□□□ 0.95
DDR1-254ENST00000504679 hCG_1984214I3L0E3 225 aa20.97■□□□□ 0.95
DDR1-254ENST00000504679 CFBP00751 764 aa20.97■□□□□ 0.95
DDR1-254ENST00000504679 SCG2P13521 617 aa20.97■□□□□ 0.95
DDR1-254ENST00000504679 RPS6P62753 249 aaKnown RBP20.97■□□□□ 0.95
DDR1-254ENST00000504679 SLC9C1Q4G0N8 1177 aa20.97■□□□□ 0.95
DDR1-254ENST00000504679 ZNF713Q8N859 430 aaPredicted RBP20.97■□□□□ 0.95
DDR1-254ENST00000504679 NPLOC4Q8TAT6 608 aa20.97■□□□□ 0.95
DDR1-254ENST00000504679 TBC1D5Q92609 795 aa20.97■□□□□ 0.95
DDR1-254ENST00000504679 BIN2Q9UBW5 565 aaPredicted RBP20.97■□□□□ 0.95
DDR1-254ENST00000504679 PPFIA3O75145 1194 aa20.96■□□□□ 0.95
DDR1-254ENST00000504679 DEXIO95424 95 aa20.96■□□□□ 0.95
DDR1-254ENST00000504679 CALML3P27482 149 aa20.96■□□□□ 0.95
DDR1-254ENST00000504679 MAML3Q96JK9 1138 aa20.96■□□□□ 0.95
DDR1-254ENST00000504679 BARHL2Q9NY43 387 aa20.96■□□□□ 0.95
DDR1-254ENST00000504679 ADD3Q9UEY8 706 aaKnown RBP20.96■□□□□ 0.95
DDR1-254ENST00000504679 GCOM1H8Y6P7 765 aaPredicted RBP20.95■□□□□ 0.94
Retrieved 100 of 20,778 RNA–protein pairs in 85.9 ms