RNA–Protein interactions for RNA: ENST00000504651.5

DDR1-253, Transcript of discoidin domain receptor tyrosine kinase 1, humanhuman

TSL 3

Gene DDR1, Length 571 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDR1-253ENST00000504651 NOM1Q5C9Z4 860 aaKnown RBP16.12■□□□□ 0.17
DDR1-253ENST00000504651 ZNF713Q8N859 430 aaPredicted RBP16.12■□□□□ 0.17
DDR1-253ENST00000504651 COA7Q96BR5 231 aa16.12■□□□□ 0.17
DDR1-253ENST00000504651 TRERF1Q96PN7 1200 aa16.12■□□□□ 0.17
DDR1-253ENST00000504651 LLPHQ9BRT6 129 aaKnown RBP16.12■□□□□ 0.17
DDR1-253ENST00000504651 MROH8Q9H579 483 aa16.12■□□□□ 0.17
DDR1-253ENST00000504651 ACAD9Q9H845 621 aa16.12■□□□□ 0.17
DDR1-253ENST00000504651 ORC3Q9UBD5 711 aaPredicted RBP16.12■□□□□ 0.17
DDR1-253ENST00000504651 RIPK3Q9Y572 518 aa16.12■□□□□ 0.17
DDR1-253ENST00000504651 PCDHA1Q9Y5I3 950 aa16.12■□□□□ 0.17
DDR1-253ENST00000504651 SMCHD1A6NHR9 2005 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 FOXN1O15353 648 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 FCGRTP55899 365 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 WWC2Q6AWC2 1192 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 CHST13Q8NET6 341 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 CD99L2Q8TCZ2 262 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 ZNF296Q8WUU4 475 aaPredicted RBP16.11■□□□□ 0.17
DDR1-253ENST00000504651 DDX11Q96FC9 970 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 ERO1AQ96HE7 468 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 FBXO40Q9UH90 709 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 MRPL11Q9Y3B7 192 aaKnown RBP16.11■□□□□ 0.17
DDR1-253ENST00000504651 IVNS1ABPQ9Y6Y0 642 aa16.11■□□□□ 0.17
DDR1-253ENST00000504651 TNPO2O14787 897 aaKnown RBP16.1■□□□□ 0.17
DDR1-253ENST00000504651 HSPA8P11142 646 aaKnown RBP16.1■□□□□ 0.17
DDR1-253ENST00000504651 NAPAP54920 295 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 HMGN5P82970 282 aaKnown RBP16.1■□□□□ 0.17
DDR1-253ENST00000504651 CUL4AQ13619 759 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 PKN1Q16512 942 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 MUM1L1Q5H9M0 696 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 PPP1R18Q6NYC8 613 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 GPR142Q7Z601 462 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 SMARCC2Q8TAQ2 1214 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 WASF1Q92558 559 aa16.1■□□□□ 0.17
DDR1-253ENST00000504651 ZSCAN21Q9Y5A6 473 aaPredicted RBP16.1■□□□□ 0.17
DDR1-253ENST00000504651 STXBP3O00186 592 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 NFIBO00712 420 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 PSMC4P43686 418 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 CTCFP49711 727 aaPredicted RBP16.09■□□□□ 0.17
DDR1-253ENST00000504651 BECN1Q14457 450 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 PLEKHH3Q7Z736 793 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 FAM184AQ8NB25 1140 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 CCDC148Q8NFR7 591 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 MMP19Q99542 508 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 ARHGAP39Q9C0H5 1083 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 BARHL2Q9NY43 387 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 PLXNA1Q9UIW2 1896 aa16.09■□□□□ 0.17
DDR1-253ENST00000504651 LCTP09848 1927 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 HSP90AA1P07900 732 aaKnown RBP16.08■□□□□ 0.16
DDR1-253ENST00000504651 FCER1AP12319 257 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 CTGFP29279 349 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 ANP32AP39687 249 aaKnown RBP16.08■□□□□ 0.16
DDR1-253ENST00000504651 KCTD2Q14681 263 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 NSMFQ6X4W1 530 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 ANKRD35Q8N283 1001 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 CCDC12Q8WUD4 166 aaPredicted RBP16.08■□□□□ 0.16
DDR1-253ENST00000504651 CLEC4DQ8WXI8 215 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 AIFM3Q96NN9 605 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 ALG1Q9BT22 464 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 VPS54Q9P1Q0 977 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 SMC3Q9UQE7 1217 aa16.08■□□□□ 0.16
DDR1-253ENST00000504651 FDPSP14324 419 aaKnown RBP16.07■□□□□ 0.16
DDR1-253ENST00000504651 XBP1P17861 261 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 PTPREP23469 700 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 FOSBP53539 338 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 ARHGEF6Q15052 776 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 TYW1BQ6NUM6 668 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.07■□□□□ 0.16
DDR1-253ENST00000504651 MCF2L2Q86YR7 1114 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 SOCS4Q8WXH5 440 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 TRIM47Q96LD4 638 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 A1CFQ9NQ94 594 aaKnown RBP16.07■□□□□ 0.16
DDR1-253ENST00000504651 TSHZ2Q9NRE2 1034 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 FOXD4L1Q9NU39 408 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 KIF3AQ9Y496 699 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 PFASO15067 1338 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 ZNFX1Q9P2E3 1918 aaKnown RBP16.07■□□□□ 0.16
DDR1-253ENST00000504651 CASP8AP2Q9UKL3 1982 aa16.07■□□□□ 0.16
DDR1-253ENST00000504651 OPLAHO14841 1288 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 STRNO43815 780 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 CFBP00751 764 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 GJB2P29033 226 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 ADCY7P51828 1080 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 LBX1P52954 281 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 GRB14Q14449 540 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 SLC30A10Q6XR72 485 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 RNF207Q6ZRF8 634 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 ABRAQ8N0Z2 381 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 SH3GLB2Q9NR46 395 aa16.06■□□□□ 0.16
DDR1-253ENST00000504651 ESYT2A0FGR8 921 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 SLC15A5A6NIM6 579 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 ADORA2AP29274 412 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 NLRP5P59047 1200 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 CAP1Q01518 475 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 TRIM29Q14134 588 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 CUL5Q93034 780 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 INTS4Q96HW7 963 aaKnown RBP16.05■□□□□ 0.16
DDR1-253ENST00000504651 NUDT12Q9BQG2 462 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 CYP39A1Q9NYL5 469 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 CEP350Q5VT06 3117 aa16.05■□□□□ 0.16
DDR1-253ENST00000504651 SMCO2A6NFE2 343 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms