RNA–Protein interactions for RNA: ENST00000504386.1

SKP2-203, Transcript of S-phase kinase associated protein 2, humanhuman

TSL 5

Gene SKP2, Length 574 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP2-203ENST00000504386 MAMDC4Q6UXC1 1216 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 SKAP1Q86WV1 359 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 ADGRF4Q8IZF3 695 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 ARRDC4Q8NCT1 418 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 DNERQ8NFT8 737 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 NUP133Q8WUM0 1156 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 RRP36Q96EU6 259 aaKnown RBP9.05□□□□□ -0.96
SKP2-203ENST00000504386 AGBL1Q96MI9 1066 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 DEFB118Q96PH6 123 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 SPZ1Q9BXG8 430 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 UNC93B1Q9H1C4 597 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 ABHD16BQ9H3Z7 469 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 LY9Q9HBG7 655 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 SPC25Q9HBM1 224 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 RLFQ13129 1914 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 ZNF536O15090 1300 aa9.05□□□□□ -0.96
SKP2-203ENST00000504386 PARP14Q460N5 1801 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 PNMA6FA0A0J9YX94 578 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 PTPDC1A2A3K4 754 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 hCG_1984214I3L0E3 225 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 SEPT4O43236 478 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 COBLO75128 1261 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 FARP2O94887 1054 aaPredicted RBP9.04□□□□□ -0.96
SKP2-203ENST00000504386 AKR1A1P14550 325 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 CNGA1P29973 690 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 ANTXR2P58335 489 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 MTFR1Q15390 333 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 NSMFQ6X4W1 530 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 RNF207Q6ZRF8 634 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 FBXL16Q8N461 479 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 ZNF713Q8N859 430 aaPredicted RBP9.04□□□□□ -0.96
SKP2-203ENST00000504386 NPLOC4Q8TAT6 608 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 CHMP4CQ96CF2 233 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 JAKMIP1Q96N16 626 aaKnown RBP9.04□□□□□ -0.96
SKP2-203ENST00000504386 TM6SF1Q9BZW5 370 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 CRISPLD2Q9H0B8 497 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 GLT8D2Q9H1C3 349 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 RIOX1Q9H6W3 641 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 UPF2Q9HAU5 1272 aaKnown RBP9.04□□□□□ -0.96
SKP2-203ENST00000504386 A1CFQ9NQ94 594 aaKnown RBP9.04□□□□□ -0.96
SKP2-203ENST00000504386 CYP39A1Q9NYL5 469 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 DDX20Q9UHI6 824 aaKnown RBP9.04□□□□□ -0.96
SKP2-203ENST00000504386 MAD2L2Q9UI95 211 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 RIPK3Q9Y572 518 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 CYP46A1Q9Y6A2 500 aa9.04□□□□□ -0.96
SKP2-203ENST00000504386 KIAA0100Q14667 2235 aaKnown RBP9.03□□□□□ -0.96
SKP2-203ENST00000504386 ZBTB43O43298 467 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 MYCP01106 439 aaPredicted RBP9.03□□□□□ -0.96
SKP2-203ENST00000504386 PGK2P07205 417 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 RARBP10826 455 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 CYBAP13498 195 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 CASTP20810 708 aaKnown RBP9.03□□□□□ -0.96
SKP2-203ENST00000504386 ANKRD1Q15327 319 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 CCL14Q16627 93 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 QRICH1Q2TAL8 776 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 CPLX2Q6PUV4 134 aaKnown RBP9.03□□□□□ -0.96
SKP2-203ENST00000504386 APOA5Q6Q788 366 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 CHST3Q7LGC8 479 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 NECAB2Q7Z6G3 386 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 FAM133AQ8N9E0 248 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 FANCBQ8NB91 859 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 CUL5Q93034 780 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 USP26Q9BXU7 913 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 UBA5Q9GZZ9 404 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 JMJD4Q9H9V9 463 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 OGDHLQ9ULD0 1010 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 FAM184BQ9ULE4 1060 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 PCDHA1Q9Y5I3 950 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 SNX14Q9Y5W7 946 aa9.03□□□□□ -0.96
SKP2-203ENST00000504386 RBBP6Q7Z6E9 1792 aaKnown RBP9.03□□□□□ -0.96
SKP2-203ENST00000504386 KBTBD13C9JR72 458 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 IGHA2P01877 340 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 EN2P19622 333 aaPredicted RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 RPS6KB1P23443 525 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 CYP2C19P33261 490 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 EXOSC10Q01780 885 aaKnown RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 AKAP17AQ02040 695 aaKnown RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 RTN1Q16799 776 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 USH1GQ495M9 461 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 BRDTQ58F21 947 aaPredicted RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 RUFY3Q7L099 469 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 ARMCX2Q7L311 632 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 RNF180Q86T96 592 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 MICU3Q86XE3 530 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 RASEFQ8IZ41 740 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 NSUN6Q8TEA1 469 aaKnown RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 CCDC12Q8WUD4 166 aaPredicted RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 MTMR8Q96EF0 704 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 IWS1Q96ST2 819 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 EHMT1Q9H9B1 1298 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 VAT1LQ9HCJ6 419 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 VTA1Q9NP79 307 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 CDKN2AIPQ9NXV6 580 aaPredicted RBP9.02□□□□□ -0.97
SKP2-203ENST00000504386 ZSWIM8A7E2V4 1837 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 PLXNB2O15031 1838 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 DOCK3Q8IZD9 2030 aa9.02□□□□□ -0.97
SKP2-203ENST00000504386 PCNTO95613 3336 aa9.01□□□□□ -0.97
SKP2-203ENST00000504386 KLF18A0A0U1RQI7 1052 aa9.01□□□□□ -0.97
SKP2-203ENST00000504386 POTEFA5A3E0 1075 aa9.01□□□□□ -0.97
SKP2-203ENST00000504386 GOLGA8AA7E2F4 631 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms