RNA–Protein interactions for RNA: ENST00000504380.1

PDLIM7-212, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 556 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-212ENST00000504380 PDE4DIPQ5VU43 2346 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 MGAMO43451 1857 aa15.35■□□□□ 0.05
PDLIM7-212ENST00000504380 NFIBO00712 420 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 PRPF3O43395 683 aaKnown RBP15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 SLC25A27O95847 323 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 FCGRTP55899 365 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 KIF22Q14807 665 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 PKN1Q16512 942 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 HEATR3Q7Z4Q2 680 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 PLEKHH3Q7Z736 793 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 NSUN7Q8NE18 718 aaKnown RBP15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 SHCBP1Q8NEM2 672 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 CLEC4DQ8WXI8 215 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 TBC1D5Q92609 795 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 ERO1AQ96HE7 468 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 AIFM3Q96NN9 605 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 AMNQ9BXJ7 453 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 SH2B1Q9NRF2 756 aaPredicted RBP15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 GABRQQ9UN88 632 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 PCDHA1Q9Y5I3 950 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 DOCK3Q8IZD9 2030 aa15.34■□□□□ 0.05
PDLIM7-212ENST00000504380 PTPDC1A2A3K4 754 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 TNPO2O14787 897 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 MAPK4P31152 587 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 MCM2P49736 904 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 FOSBP53539 338 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 AKAP17AQ02040 695 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 NOM1Q5C9Z4 860 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 WWC2Q6AWC2 1192 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 CPLX2Q6PUV4 134 aaKnown RBP15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 MMP19Q99542 508 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 MROH8Q9H579 483 aa15.33■□□□□ 0.04
PDLIM7-212ENST00000504380 PLXNB2O15031 1838 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 OPLAHO14841 1288 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 PGK2P07205 417 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 FDPSP14324 419 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 PTPREP23469 700 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 PFKFB3Q16875 520 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 TKFCQ3LXA3 575 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 TYW1BQ6NUM6 668 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 NSMFQ6X4W1 530 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 CHST13Q8NET6 341 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 SHISA4Q96DD7 197 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 PURBQ96QR8 312 aaKnown RBP15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 ACAD9Q9H845 621 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 FOXD4L1Q9NU39 408 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 ORC3Q9UBD5 711 aaPredicted RBP15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 ABCB11O95342 1321 aa15.32■□□□□ 0.04
PDLIM7-212ENST00000504380 STXBP3O00186 592 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 CDKL5O76039 1030 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 SCG2P13521 617 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 PRKCZQ05513 592 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 TRIM22Q8IYM9 498 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 SNX21Q969T3 373 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 A1CFQ9NQ94 594 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 GJB4Q9NTQ9 266 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 GJD2Q9UKL4 321 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 MRPL11Q9Y3B7 192 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 TRIM17Q9Y577 477 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 IVNS1ABPQ9Y6Y0 642 aa15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 ZNFX1Q9P2E3 1918 aaKnown RBP15.31■□□□□ 0.04
PDLIM7-212ENST00000504380 K7ELQ4 463 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 COBLO75128 1261 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 FCER1AP12319 257 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 CYP2B6P20813 491 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 CALML3P27482 149 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 ADORA2AP29274 412 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 COPB2P35606 906 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 NAPAP54920 295 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 BAATQ14032 418 aaPredicted RBP15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 MORN1Q5T089 497 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 SLC30A10Q6XR72 485 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 OTOP1Q7RTM1 612 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 HSCBQ8IWL3 235 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 ANKRD35Q8N283 1001 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 IL27Q8NEV9 243 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 VPS54Q9P1Q0 977 aa15.3■□□□□ 0.04
PDLIM7-212ENST00000504380 SLC15A5A6NIM6 579 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 DEXIO95424 95 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 CFBP00751 764 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 HOXA13P31271 388 aaPredicted RBP15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 FLT3LGP49771 235 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 CNTN2Q02246 1040 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 GRB14Q14449 540 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 KCTD2Q14681 263 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 SMARCC2Q8TAQ2 1214 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 NPLOC4Q8TAT6 608 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 BARHL2Q9NY43 387 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 CYP39A1Q9NYL5 469 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 FBXO40Q9UH90 709 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 PNMA2Q9UL42 364 aa15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 DDX49Q9Y6V7 483 aaKnown RBP15.29■□□□□ 0.04
PDLIM7-212ENST00000504380 STK36Q9NRP7 1315 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 MAP2K5Q13163 448 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 CUL4AQ13619 759 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 UBE2SQ16763 222 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 RNF207Q6ZRF8 634 aa15.28■□□□□ 0.04
PDLIM7-212ENST00000504380 SPRYD3Q8NCJ5 442 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms