RNA–Protein interactions for RNA: ENST00000503401.1

SCLT1-205, Transcript of sodium channel and clathrin linker 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene SCLT1, Length 1,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCLT1-205ENST00000503401 RBM28Q9NW13 759 aaKnown RBP19.14■□□□□ 0.65
SCLT1-205ENST00000503401 ZNF236Q9UL36 1845 aa19.14■□□□□ 0.65
SCLT1-205ENST00000503401 NFIBO00712 420 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 PPFIA3O75145 1194 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 RGS2P41220 211 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 RCAN1P53805 252 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 KCTD2Q14681 263 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 CCL14Q16627 93 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 DPP9Q86TI2 863 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 FBXO11Q86XK2 927 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 TNS4Q8IZW8 715 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 ANKRD35Q8N283 1001 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 NPLOC4Q8TAT6 608 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 LZTS2Q9BRK4 669 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 TPCN1Q9ULQ1 816 aa19.13■□□□□ 0.65
SCLT1-205ENST00000503401 ADCY3O60266 1144 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 IRF5Q13568 498 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 TKFCQ3LXA3 575 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 ABRAQ8N0Z2 381 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 CLEC4DQ8WXI8 215 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 ALDH8A1Q9H2A2 487 aaPredicted RBP19.12■□□□□ 0.65
SCLT1-205ENST00000503401 A1CFQ9NQ94 594 aaKnown RBP19.12■□□□□ 0.65
SCLT1-205ENST00000503401 FBXO40Q9UH90 709 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 CNTNAP5Q8WYK1 1306 aa19.12■□□□□ 0.65
SCLT1-205ENST00000503401 SLC9C1Q4G0N8 1177 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 NSMFQ6X4W1 530 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 RRP36Q96EU6 259 aaKnown RBP19.11■□□□□ 0.65
SCLT1-205ENST00000503401 DDX11Q96FC9 970 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 APBA2Q99767 749 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 AMNQ9BXJ7 453 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 NID2Q14112 1375 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 LCTP09848 1927 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 PNMA6FA0A0J9YX94 578 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 MYCP01106 439 aaPredicted RBP19.11■□□□□ 0.65
SCLT1-205ENST00000503401 SMARCA1P28370 1054 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 GRK4P32298 578 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 FUT2Q10981 343 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 TRIB2Q92519 343 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 ZNF274Q96GC6 653 aaPredicted RBP19.11■□□□□ 0.65
SCLT1-205ENST00000503401 FLRT1Q9NZU1 646 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 PCDHA1Q9Y5I3 950 aa19.11■□□□□ 0.65
SCLT1-205ENST00000503401 RBBP6Q7Z6E9 1792 aaKnown RBP19.1■□□□□ 0.65
SCLT1-205ENST00000503401 LARGE1O95461 756 aa19.1■□□□□ 0.65
SCLT1-205ENST00000503401 ANKRD1Q15327 319 aa19.1■□□□□ 0.65
SCLT1-205ENST00000503401 PURBQ96QR8 312 aaKnown RBP19.1■□□□□ 0.65
SCLT1-205ENST00000503401 SEC63Q9UGP8 760 aaKnown RBP19.1■□□□□ 0.65
SCLT1-205ENST00000503401 MCM3APO60318 1980 aa19.1■□□□□ 0.65
SCLT1-205ENST00000503401 ABCB11O95342 1321 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 CCDC196A0A1B0GTZ2 297 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 DTNBO60941 627 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 XRCC5P13010 732 aaKnown RBP19.09■□□□□ 0.65
SCLT1-205ENST00000503401 TRIM32Q13049 653 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 DHX30Q7L2E3 1194 aaKnown RBP eCLIP19.09■□□□□ 0.65
SCLT1-205ENST00000503401 SLAIN1Q8ND83 568 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 TBC1D5Q92609 795 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 PHKBQ93100 1093 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 CYP39A1Q9NYL5 469 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 BIN2Q9UBW5 565 aaPredicted RBP19.09■□□□□ 0.65
SCLT1-205ENST00000503401 PNMA2Q9UL42 364 aa19.09■□□□□ 0.65
SCLT1-205ENST00000503401 V9GY48 417 aaPredicted RBP19.09■□□□□ 0.65
SCLT1-205ENST00000503401 DNAJC25-GNG10A0A024R161 153 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 PTPDC1A2A3K4 754 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 HOXC6P09630 235 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 CNTN2Q02246 1040 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 BAATQ14032 418 aaPredicted RBP19.08■□□□□ 0.65
SCLT1-205ENST00000503401 PPP2R5BQ15173 497 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 ZNF792Q3KQV3 632 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 SLC30A10Q6XR72 485 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 PXYLP1Q8TE99 480 aa19.08■□□□□ 0.65
SCLT1-205ENST00000503401 SCRN1Q12765 414 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 RABEP1Q15276 862 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 NTRK3Q16288 839 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 ME3Q16798 604 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 NECAB1Q8N987 351 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 GPKOWQ92917 476 aaPredicted RBP eCLIP19.07■□□□□ 0.64
SCLT1-205ENST00000503401 ABHD8Q96I13 439 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 MAML3Q96JK9 1138 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 SLKQ9H2G2 1235 aaPredicted RBP19.07■□□□□ 0.64
SCLT1-205ENST00000503401 MRPL11Q9Y3B7 192 aaKnown RBP19.07■□□□□ 0.64
SCLT1-205ENST00000503401 PFASO15067 1338 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 POTEB2H3BUK9 544 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 OPLAHO14841 1288 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 INHAP05111 366 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 CALML3P27482 149 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 RPS6P62753 249 aaKnown RBP19.07■□□□□ 0.64
SCLT1-205ENST00000503401 RNF207Q6ZRF8 634 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 FGD4Q96M96 766 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 SLC5A4Q9NY91 659 aa19.07■□□□□ 0.64
SCLT1-205ENST00000503401 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
SCLT1-205ENST00000503401 MKI67P46013 3256 aaKnown RBP19.06■□□□□ 0.64
SCLT1-205ENST00000503401 PFKFB2O60825 505 aa19.06■□□□□ 0.64
SCLT1-205ENST00000503401 HMGCRP04035 888 aa19.06■□□□□ 0.64
SCLT1-205ENST00000503401 CYP2C19P33261 490 aa19.06■□□□□ 0.64
SCLT1-205ENST00000503401 HEATR3Q7Z4Q2 680 aa19.06■□□□□ 0.64
SCLT1-205ENST00000503401 FAM133AQ8N9E0 248 aa19.06■□□□□ 0.64
SCLT1-205ENST00000503401 SLC26A6Q9BXS9 759 aa19.06■□□□□ 0.64
SCLT1-205ENST00000503401 CPLX1O14810 134 aa19.05■□□□□ 0.64
SCLT1-205ENST00000503401 CFBP00751 764 aa19.05■□□□□ 0.64
SCLT1-205ENST00000503401 MTFR1Q15390 333 aa19.05■□□□□ 0.64
SCLT1-205ENST00000503401 ARMC5Q96C12 935 aa19.05■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms