RNA–Protein interactions for RNA: ENST00000503346.1

PDLIM7-209, Transcript of PDZ and LIM domain 7, humanhuman

TSL 2

Gene PDLIM7, Length 669 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-209ENST00000503346 CYP39A1Q9NYL5 469 aa21.2■□□□□ 0.98
PDLIM7-209ENST00000503346 POTEB2H3BUK9 544 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 NFIBO00712 420 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 SGPL1O95470 568 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 CAPN2P17655 700 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 CASTP20810 708 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 SMARCA1P28370 1054 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 GNAQP50148 359 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 APOA5Q6Q788 366 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 MAMDC4Q6UXC1 1216 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 SYNE3Q6ZMZ3 975 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 U2AF1L4Q8WU68 220 aaKnown RBP21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 FGD4Q96M96 766 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 DEFB118Q96PH6 123 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 LZTS2Q9BRK4 669 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 TINF2Q9BSI4 451 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 TM6SF1Q9BZW5 370 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 NRBP1Q9UHY1 535 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 ABCB11O95342 1321 aa21.19■□□□□ 0.98
PDLIM7-209ENST00000503346 ZBTB5O15062 677 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 CYBAP13498 195 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 CCND3P30281 292 aaPredicted RBP21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 USH1GQ495M9 461 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 NSMFQ6X4W1 530 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 FBXO11Q86XK2 927 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 FANCBQ8NB91 859 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 RGS22Q8NE09 1264 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 SHISA4Q96DD7 197 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 SPZ1Q9BXG8 430 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 AMNQ9BXJ7 453 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 AGXT2Q9BYV1 514 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 MAF1Q9H063 256 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 CRISPLD2Q9H0B8 497 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 ZSWIM6Q9HCJ5 1215 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 BRPF3Q9ULD4 1205 aa21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 RBBP6Q7Z6E9 1792 aaKnown RBP21.18■□□□□ 0.98
PDLIM7-209ENST00000503346 BRCA2P51587 3418 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 RXRAP19793 462 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 RCAN1P53805 252 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 CNTN2Q02246 1040 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 Q6ZUG5 572 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 RUFY3Q7L099 469 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 MICU3Q86XE3 530 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 TRPV1Q8NER1 839 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 SYNGAP1Q96PV0 1343 aa21.17■□□□□ 0.98
PDLIM7-209ENST00000503346 ZBTB43O43298 467 aa21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 PPP1R11O60927 126 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 ANAPC15P60006 121 aa21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 FGD1P98174 961 aa21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 BAATQ14032 418 aaPredicted RBP21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 RAB11FIP4Q86YS3 637 aa21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 SRBD1Q8N5C6 995 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 PIGSQ96S52 555 aa21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 MRPL11Q9Y3B7 192 aaKnown RBP21.16■□□□□ 0.98
PDLIM7-209ENST00000503346 PNMA6FA0A0J9YX94 578 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 KLF18A0A0U1RQI7 1052 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 SOWAHBA6NEL2 793 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 PLEKHA8P1O95397 391 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 SEC24BO95487 1268 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 TRAF1Q13077 416 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 C8orf34Q49A92 452 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 RNF207Q6ZRF8 634 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 TMTC3Q6ZXV5 915 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 HOMER1Q86YM7 354 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 CCDC144CPQ8IYA2 1237 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 BRF1Q92994 677 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 IL17RAQ96F46 866 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 RBM28Q9NW13 759 aaKnown RBP21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 CYP46A1Q9Y6A2 500 aa21.15■□□□□ 0.98
PDLIM7-209ENST00000503346 ASTN1O14525 1302 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 PTPDC1A2A3K4 754 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 MSCO60682 206 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 RPS6P62753 249 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 LHX8Q68G74 356 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 SLC30A10Q6XR72 485 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 DDX20Q9UHI6 824 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 OGDHLQ9ULD0 1010 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 PCDHA1Q9Y5I3 950 aa21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 KIAA0100Q14667 2235 aaKnown RBP21.14■□□□□ 0.97
PDLIM7-209ENST00000503346 ASB14A6NK59 587 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 SEPT4O43236 478 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 SNAI1O95863 264 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 TFRCP02786 760 aaKnown RBP21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 RTN1Q16799 776 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 PRAMEF19Q5SWL8 479 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 ARMCX2Q7L311 632 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 MCF2L2Q86YR7 1114 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 CDKN2AIPQ9NXV6 580 aaPredicted RBP21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 CNPY2Q9Y2B0 182 aa21.13■□□□□ 0.97
PDLIM7-209ENST00000503346 LOC102724159A0A0B4J2E5 919 aa21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 ZNF865P0CJ78 1059 aaPredicted RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 CNGA1P29973 690 aa21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 EVCP57679 992 aa21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 GHRHRQ02643 423 aa21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 APOBRQ0VD83 1088 aa21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 PPP2R5BQ15173 497 aa21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 PWP2Q15269 919 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 CMTR1Q8N1G2 835 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 RRP36Q96EU6 259 aaKnown RBP21.12■□□□□ 0.97
PDLIM7-209ENST00000503346 PURBQ96QR8 312 aaKnown RBP21.12■□□□□ 0.97
Retrieved 100 of 20,778 RNA–protein pairs in 42.9 ms