RNA–Protein interactions for RNA: ENST00000503274.1

NIPBL-203, Transcript of NIPBL, cohesin loading factor, humanhuman

TSL 5

Gene NIPBL, Length 789 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIPBL-203ENST00000503274 IFRD2Q12894 506 aaPredicted RBP8.79□□□□□ -1
NIPBL-203ENST00000503274 FYB2Q5VWT5 728 aa8.79□□□□□ -1
NIPBL-203ENST00000503274 HLA-DQA1Q5Y7H0 255 aa8.79□□□□□ -1
NIPBL-203ENST00000503274 KSR1Q8IVT5 923 aa8.79□□□□□ -1
NIPBL-203ENST00000503274 LILRA2Q8N149 483 aa8.79□□□□□ -1
NIPBL-203ENST00000503274 LRRC47Q8N1G4 583 aaKnown RBP8.79□□□□□ -1
NIPBL-203ENST00000503274 ABHD4Q8TB40 342 aa8.79□□□□□ -1
NIPBL-203ENST00000503274 COPS5Q92905 334 aa8.79□□□□□ -1
NIPBL-203ENST00000503274 CAPNS1P04632 268 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 TXKP42681 527 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 CEBPAP49715 358 aaPredicted RBP8.78□□□□□ -1
NIPBL-203ENST00000503274 RTP1P59025 263 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 HSP90AA2PQ14568 343 aaPredicted RBP8.78□□□□□ -1
NIPBL-203ENST00000503274 NFE2L2Q16236 605 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 CCDC140Q96MF4 163 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 KRTAP9-9Q9BYP9 154 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 KRTAP9-4Q9BYQ2 154 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 PFDN2Q9UHV9 154 aa8.78□□□□□ -1
NIPBL-203ENST00000503274 A0A1W2PQ45 241 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-203ENST00000503274 A0A1W2PQY0 241 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 NOTOA8MTQ0 251 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 NRDCO43847 1150 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 SNRPB2P08579 225 aaKnown RBP8.77□□□□□ -1.01
NIPBL-203ENST00000503274 CCDC144BQ3MJ40 725 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 SLCO6A1Q86UG4 719 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 SPATA9Q9BWV2 254 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 ZSWIM4Q9H7M6 989 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 CWC22Q9HCG8 908 aaKnown RBP8.77□□□□□ -1.01
NIPBL-203ENST00000503274 GPRC5CQ9NQ84 441 aa8.77□□□□□ -1.01
NIPBL-203ENST00000503274 CDK11AQ9UQ88 783 aaPredicted RBP8.77□□□□□ -1.01
NIPBL-203ENST00000503274 WTIPA6NIX2 430 aaPredicted RBP8.76□□□□□ -1.01
NIPBL-203ENST00000503274 PSPNO60542 156 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 ECI1P42126 302 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 GRIA2P42262 883 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 SSRP1Q08945 709 aaKnown RBP8.76□□□□□ -1.01
NIPBL-203ENST00000503274 BMS1Q14692 1282 aaKnown RBP8.76□□□□□ -1.01
NIPBL-203ENST00000503274 SNX17Q15036 470 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 KCNMB1Q16558 191 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 TIGD5Q53EQ6 642 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 TMEM67Q5HYA8 995 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 DPH6Q7L8W6 267 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 ZSWIM9Q86XI8 627 aa8.76□□□□□ -1.01
NIPBL-203ENST00000503274 AARSD1Q9BTE6 412 aaKnown RBP8.76□□□□□ -1.01
NIPBL-203ENST00000503274 RB1CC1Q8TDY2 1594 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 TRBV23OR9-2A0A075B6M9 112 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 CPP00450 1065 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 SCG5P05408 212 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 THBDP07204 575 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 PAMP19021 973 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 KCNJ6P48051 423 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 GFRA1P56159 465 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 CYP4F3Q08477 520 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 SF1Q15637 639 aaKnown RBP8.75□□□□□ -1.01
NIPBL-203ENST00000503274 HSF5Q4G112 596 aaPredicted RBP8.75□□□□□ -1.01
NIPBL-203ENST00000503274 GALNT18Q6P9A2 607 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 JAMLQ86YT9 394 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 FAM168AQ92567 244 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 JMJD8Q96S16 334 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 DNAJC7Q99615 494 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 ARHGEF4Q9NR80 690 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 GPR160Q9UJ42 338 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 TAF6LQ9Y6J9 622 aa8.75□□□□□ -1.01
NIPBL-203ENST00000503274 TRAV20A0A0B4J274 112 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 NPHP3-ACAD11A0A0J9YXS1 232 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 DIAPH1O60610 1272 aaKnown RBP8.74□□□□□ -1.01
NIPBL-203ENST00000503274 GLI1P08151 1106 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 PLS3P13797 630 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 FRS2Q8WU20 508 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 MRFAP1L1Q96HT8 127 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 IER2Q9BTL4 223 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 RNF32Q9H0A6 362 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 CLEC1BQ9P126 229 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 KDM2BQ8NHM5 1336 aa8.74□□□□□ -1.01
NIPBL-203ENST00000503274 L1CAMP32004 1257 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 LAPTM5Q13571 262 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 NLRX1Q86UT6 975 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 TMEM145Q8NBT3 493 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 NPLOC4Q8TAT6 608 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 SHISA4Q96DD7 197 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 ASIC4Q96FT7 647 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 PLCD4Q9BRC7 762 aa8.73□□□□□ -1.01
NIPBL-203ENST00000503274 CARMIL2Q6F5E8 1435 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 PRODHO43272 600 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 ADCY3O60266 1144 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 EFEMP2O95967 443 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 FGFR1P11362 822 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 MAP4K2Q12851 820 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 PRSS53Q2L4Q9 553 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 CPNE8Q86YQ8 564 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 ZBTB38Q8NAP3 1195 aaPredicted RBP8.72□□□□□ -1.01
NIPBL-203ENST00000503274 KREMEN2Q8NCW0 462 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 KCTD13Q8WZ19 329 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 MMP19Q99542 508 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 IMPACTQ9P2X3 320 aa8.72□□□□□ -1.01
NIPBL-203ENST00000503274 A0A1W2PQ27 194 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 A0A1W2PQ64 194 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 A0A1W2PQC6 194 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 A0A1W2PQD8 194 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 PRKCAP17252 672 aa8.71□□□□□ -1.02
NIPBL-203ENST00000503274 SLC35F1Q5T1Q4 408 aa8.71□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms