RNA–Protein interactions for RNA: ENST00000502612.5

NEDD4-203, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

TSL 3

Gene NEDD4, Length 652 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-203ENST00000502612 RNF111Q6ZNA4 994 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 CCDC103Q8IW40 242 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 PPIL6Q8IXY8 311 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 DHX37Q8IY37 1157 aaKnown RBP9.07□□□□□ -0.96
NEDD4-203ENST00000502612 SLC7A14Q8TBB6 771 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 CARS2Q9HA77 564 aaKnown RBP9.07□□□□□ -0.96
NEDD4-203ENST00000502612 SLC52A2Q9HAB3 445 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 NDOR1Q9UHB4 597 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 VAV3Q9UKW4 847 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 TRAF6Q9Y4K3 522 aa9.07□□□□□ -0.96
NEDD4-203ENST00000502612 IRS4O14654 1257 aaPredicted RBP9.06□□□□□ -0.96
NEDD4-203ENST00000502612 PLD2O14939 933 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 FGF10O15520 208 aaPredicted RBP9.06□□□□□ -0.96
NEDD4-203ENST00000502612 CPP00450 1065 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 CD8BP10966 210 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 SSTR4P31391 388 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 NOP2P46087 812 aaKnown RBP9.06□□□□□ -0.96
NEDD4-203ENST00000502612 CEBPAP49715 358 aaPredicted RBP9.06□□□□□ -0.96
NEDD4-203ENST00000502612 SEPHS1P49903 392 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 MBLAC2Q68D91 279 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 WAPLQ7Z5K2 1190 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 CCDC140Q96MF4 163 aa9.06□□□□□ -0.96
NEDD4-203ENST00000502612 BSDC1Q9NW68 430 aaPredicted RBP9.06□□□□□ -0.96
NEDD4-203ENST00000502612 CCDC163A0A0D9SF12 145 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 LCP1P13796 627 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 SDSP20132 328 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 GRIK1P39086 918 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 KSR1Q8IVT5 923 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 SYNPOQ8N3V7 929 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 MRPL4Q9BYD3 311 aaKnown RBP9.05□□□□□ -0.96
NEDD4-203ENST00000502612 SLKQ9H2G2 1235 aaPredicted RBP9.05□□□□□ -0.96
NEDD4-203ENST00000502612 PRDM7Q9NQW5 492 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 RNF112Q9ULX5 631 aa9.05□□□□□ -0.96
NEDD4-203ENST00000502612 DNAJC25-GNG10A0A024R161 153 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 COBLO75128 1261 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 INF2Q27J81 1249 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 NFXL1Q6ZNB6 911 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 BRAPQ7Z569 592 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 FGD2Q7Z6J4 655 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 CPNE8Q86YQ8 564 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 TMEM52Q8NDY8 209 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 PTCHD1Q96NR3 888 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 ERVK13-1Q9NX77 482 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 EBF1Q9UH73 591 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 SFMBT1Q9UHJ3 866 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 ZNF281Q9Y2X9 895 aa9.04□□□□□ -0.96
NEDD4-203ENST00000502612 MEFVO15553 781 aaPredicted RBP9.03□□□□□ -0.96
NEDD4-203ENST00000502612 TRIM61Q5EBN2 209 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 EEF1DP3Q658K8 133 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 FILIP1Q7Z7B0 1213 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 NINJ1Q92982 152 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 MISP3Q96FF7 219 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 GPATCH3Q96I76 525 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 TRIM39Q9HCM9 518 aa9.03□□□□□ -0.96
NEDD4-203ENST00000502612 MSCO60682 206 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 SPINK2P20155 84 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 CD97P48960 835 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 GABREP78334 506 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 ZP2Q05996 745 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 LAPTM5Q13571 262 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 FNDC3BQ53EP0 1204 aaKnown RBP9.02□□□□□ -0.97
NEDD4-203ENST00000502612 RALGPS1Q5JS13 557 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 INTS5Q6P9B9 1019 aaKnown RBP9.02□□□□□ -0.97
NEDD4-203ENST00000502612 NIM1KQ8IY84 436 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 NAT16Q8N8M0 369 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 GSTCDQ8NEC7 633 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 G6PC3Q9BUM1 346 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 PHF20Q9BVI0 1012 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 SLAMF8Q9P0V8 285 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 CCDC39Q9UFE4 941 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 SLC5A6Q9Y289 635 aa9.02□□□□□ -0.97
NEDD4-203ENST00000502612 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.01□□□□□ -0.97
NEDD4-203ENST00000502612 RFPL3O75679 317 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 DNAJC8O75937 253 aaPredicted RBP9.01□□□□□ -0.97
NEDD4-203ENST00000502612 RASGRP1O95267 797 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 PRNPP04156 253 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 MASP1P48740 699 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 TM4SF20Q53R12 229 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 ACBD5Q5T8D3 534 aaPredicted RBP9.01□□□□□ -0.97
NEDD4-203ENST00000502612 STYK1Q6J9G0 422 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 DTX1Q86Y01 620 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 PTPRN2Q92932 1015 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 SCLYQ96I15 445 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 IFT57Q9NWB7 429 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 PLAAQ9Y263 795 aa9.01□□□□□ -0.97
NEDD4-203ENST00000502612 NPHP3-ACAD11A0A0J9YXS1 232 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 ADAMTS4O75173 837 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 PAMP19021 973 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 ANGEL2Q5VTE6 544 aaKnown RBP9□□□□□ -0.97
NEDD4-203ENST00000502612 FLCNQ8NFG4 579 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 DCAF4Q8WV16 495 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 MFSD3Q96ES6 412 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 FCRL2Q96LA5 508 aaPredicted RBP9□□□□□ -0.97
NEDD4-203ENST00000502612 ADAMTS10Q9H324 1103 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 FBXL7Q9UJT9 491 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 NPFFR2Q9Y5X5 522 aa9□□□□□ -0.97
NEDD4-203ENST00000502612 LTBRP36941 435 aa8.99□□□□□ -0.97
NEDD4-203ENST00000502612 ZNF460Q14592 562 aa8.99□□□□□ -0.97
NEDD4-203ENST00000502612 RNF187Q5TA31 235 aaPredicted RBP8.99□□□□□ -0.97
NEDD4-203ENST00000502612 VSIG10LQ86VR7 867 aa8.99□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms