RNA–Protein interactions for RNA: ENST00000498653.5

FXN-205, Transcript of frataxin, humanhuman

TSL 1 (best) BASIC

Gene FXN, Length 856 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FXN-205ENST00000498653 AOC1P19801 751 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 EIF4A1P60842 406 aaKnown RBP6.64□□□□□ -1.35
FXN-205ENST00000498653 IRX3P78415 501 aaPredicted RBP6.64□□□□□ -1.35
FXN-205ENST00000498653 HYAL1Q12794 435 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 DIXDC1Q155Q3 683 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 APOBEC3HQ6NTF7 200 aaKnown RBP6.64□□□□□ -1.35
FXN-205ENST00000498653 C15orf52Q6ZUT6 534 aaKnown RBP6.64□□□□□ -1.35
FXN-205ENST00000498653 ZNF513Q8N8E2 541 aaPredicted RBP6.64□□□□□ -1.35
FXN-205ENST00000498653 SMRP1Q8NCR6 262 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 KLHDC9Q8NEP7 349 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 NETO1Q8TDF5 533 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 XAGE3Q8WTP9 111 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 C17orf80Q9BSJ5 609 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 PRKRIP1Q9H875 184 aaPredicted RBP6.64□□□□□ -1.35
FXN-205ENST00000498653 TMOD2Q9NZR1 351 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 WASF3Q9UPY6 502 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 GPSM3Q9Y4H4 160 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 RAI2Q9Y5P3 530 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 MAST3O60307 1309 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 SYNRGQ9UMZ2 1314 aa6.64□□□□□ -1.35
FXN-205ENST00000498653 A0A0U1RQG5 324 aaPredicted RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 TLR3O15455 904 aaKnown RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 LINC01565O15544 149 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 NTRK1P04629 796 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 HOXD8P13378 290 aaPredicted RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 CD46P15529 392 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 NCLP19338 710 aaKnown RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 CCR10P46092 362 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 C19orf57Q0VDD7 668 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 AIMP1Q12904 312 aaKnown RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 DCTN1Q14203 1278 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 PTPROQ16827 1216 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 SH3D19Q5HYK7 790 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 ZC3H14Q6PJT7 736 aaKnown RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 CCAR1Q8IX12 1150 aaKnown RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 RIN2Q8WYP3 895 aaPredicted RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 RPGRIP1Q96KN7 1286 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 PAGR1Q9BTK6 254 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 PHF7Q9BWX1 381 aaPredicted RBP6.63□□□□□ -1.35
FXN-205ENST00000498653 MYO10Q9HD67 2058 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 HCSTQ9UBK5 93 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 CTNNA3Q9UI47 895 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 USP18Q9UMW8 372 aa6.63□□□□□ -1.35
FXN-205ENST00000498653 EIF4E1BA6NMX2 242 aaKnown RBP6.62□□□□□ -1.35
FXN-205ENST00000498653 CFHP08603 1231 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 NPR3P17342 541 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 HOXA7P31268 230 aaPredicted RBP6.62□□□□□ -1.35
FXN-205ENST00000498653 GTF2F1P35269 517 aaKnown RBP eCLIP6.62□□□□□ -1.35
FXN-205ENST00000498653 RRP1P56182 461 aaKnown RBP6.62□□□□□ -1.35
FXN-205ENST00000498653 TCP10Q12799 353 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 NFIAQ12857 509 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 SPP2Q13103 211 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 KCNA10Q16322 511 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 DEFB128Q7Z7B8 93 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 KREMEN2Q8NCW0 462 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 PHACTR3Q96KR7 559 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 ZDHHC15Q96MV8 337 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 CDC5LQ99459 802 aaKnown RBP6.62□□□□□ -1.35
FXN-205ENST00000498653 REPIN1Q9BWE0 567 aaKnown RBP6.62□□□□□ -1.35
FXN-205ENST00000498653 NOTCH2Q04721 2471 aa6.62□□□□□ -1.35
FXN-205ENST00000498653 NCK2O43639 380 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 SP9P0CG40 484 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 PPP2R1AP30153 589 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 USP46P62068 366 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 HDLBPQ00341 1268 aaKnown RBP6.61□□□□□ -1.35
FXN-205ENST00000498653 MTMR3Q13615 1198 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 C19orf48Q6RUI8 117 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 UBALD2Q8IYN6 164 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 FLCNQ8NFG4 579 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 GLT1D1Q96MS3 346 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 CWC22Q9HCG8 908 aaKnown RBP6.61□□□□□ -1.35
FXN-205ENST00000498653 INCENPQ9NQS7 918 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 USP15Q9Y4E8 981 aaPredicted RBP6.61□□□□□ -1.35
FXN-205ENST00000498653 DYNC1LI1Q9Y6G9 523 aaKnown RBP6.61□□□□□ -1.35
FXN-205ENST00000498653 CACNA1IQ9P0X4 2223 aa6.61□□□□□ -1.35
FXN-205ENST00000498653 PDE8AO60658 829 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 CTNND1O60716 968 aaKnown RBP6.6□□□□□ -1.35
FXN-205ENST00000498653 COBLO75128 1261 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 GLRX3O76003 335 aaKnown RBP6.6□□□□□ -1.35
FXN-205ENST00000498653 MS4A1P11836 297 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 ACTN1P12814 892 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 CST5P28325 142 aaPredicted RBP6.6□□□□□ -1.35
FXN-205ENST00000498653 ADORA2AP29274 412 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 GCGRP47871 477 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 DEFB103AP81534 67 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 MAP3K10Q02779 954 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 COL28A1Q2UY09 1125 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 ZNF804AQ7Z570 1209 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 ZBTB33Q86T24 672 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 SLC43A3Q8NBI5 491 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.6□□□□□ -1.35
FXN-205ENST00000498653 ZNF280CQ8ND82 737 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 MAP4K1Q92918 833 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 TEKT1Q969V4 418 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 FAM84BQ96KN1 310 aaPredicted RBP6.6□□□□□ -1.35
FXN-205ENST00000498653 CFAP53Q96M91 514 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 RSPH6AQ9H0K4 717 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 MFSD1Q9H3U5 465 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 GREM2Q9H772 168 aa6.6□□□□□ -1.35
FXN-205ENST00000498653 CLEC1BQ9P126 229 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms