RNA–Protein interactions for RNA: ENST00000498524.5

ANKRD28-213, Transcript of ankyrin repeat domain 28, humanhuman

TSL 2

Gene ANKRD28, Length 4,289 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ANKRD28-213ENST00000498524 KDM6AO15550 1401 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 URI1O94763 535 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 GJA8P48165 433 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 BRD3Q15059 726 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 GNPTABQ3T906 1256 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 ATL3Q6DD88 541 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 CCDC70Q6NSX1 233 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 TXLNBQ8N3L3 684 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 MAFAQ8NHW3 353 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 SSH3Q8TE77 659 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 NEK1Q96PY6 1258 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 PLA2G12BQ9BX93 195 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 RSPH9Q9H1X1 276 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 BOLA2Q9H3K6 86 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 CEMIPQ8WUJ3 1361 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 C4BP0C0L5 1744 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 ZNF609O15014 1411 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 COL3A1P02461 1466 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 PALM3A6NDB9 673 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 USP17L12C9JPN9 530 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 USP17L21D6R901 530 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 FGBP02675 491 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 STAG3L1P0CL83 205 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 SAFBQ15424 915 aaKnown RBP eCLIP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 TMEM31Q5JXX7 168 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 PPP4R4Q6NUP7 873 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 TMC6Q7Z403 805 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 LEO1Q8WVC0 666 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 HERVK_113Q902F9 699 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 BRF1Q92994 677 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 SUDS3Q9H7L9 328 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 EIF2AK3Q9NZJ5 1116 aaKnown RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 C4AP0C0L4 1744 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 UBN2Q6ZU65 1347 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 H0YGN5 161 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 NOP56O00567 594 aaKnown RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 ANXA1P04083 346 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 CPA1P15085 419 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 RFC2P35250 354 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 BTDP43251 543 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 DMWDQ09019 674 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 COG2Q14746 738 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 DACT2Q5SW24 774 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 ABI1Q8IZP0 508 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 MRPS27Q92552 414 aaKnown RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 MAF1Q9H063 256 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 IQSEC3Q9UPP2 1182 aaPredicted RBP4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 ADGRA2Q96PE1 1338 aa4.42□□□□□ -1.7
ANKRD28-213ENST00000498524 MAGEB6P1A0A0J9YX57 407 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 NKRFO15226 690 aaKnown RBP eCLIP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 IPO7O95373 1038 aaKnown RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 TOP1P11387 765 aaKnown RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 PRKAR2AP13861 404 aaKnown RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 LDLRAD1Q5T700 205 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 SDE2Q6IQ49 451 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 KCNV1Q6PIU1 500 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 AOPEPQ8N6M6 819 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 SHCBP1Q8NEM2 672 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 MRFAP1L1Q96HT8 127 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 V9GYY5 206 aaPredicted RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 NUP188Q5SRE5 1749 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 MOXD2PA6NHM9 499 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 DKC1O60832 514 aaKnown RBP eCLIP4.41□□□□□ -1.72e-12■■■■■ 55.8
ANKRD28-213ENST00000498524 AMHP03971 560 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 BDNFP23560 247 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 CDC25BP30305 580 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ZC3H14Q6PJT7 736 aaKnown RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 IQCA1Q86XH1 822 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ANKRD13CQ8N6S4 541 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 KCNB2Q92953 911 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 SMARCE1Q969G3 411 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 PAWRQ96IZ0 340 aaKnown RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ZDHHC15Q96MV8 337 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 GBP3Q9H0R5 595 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 CCDC8Q9H0W5 538 aaPredicted RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 KANSL2Q9H9L4 492 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 TRPM3Q9HCF6 1732 aaPredicted RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ZSWIM6Q9HCJ5 1215 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 IMPACTQ9P2X3 320 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ZNF215Q9UL58 517 aaPredicted RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ARHGEF28Q8N1W1 1705 aaKnown RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 NEURL1BA8MQ27 555 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 CDKL5O76039 1030 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 POTEIP0CG38 1075 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 POTEJP0CG39 1038 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 RPS6KB1P23443 525 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 CPT1AP50416 773 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 LRMPQ12912 555 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 NMIQ13287 307 aaPredicted RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 ELF2Q15723 593 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 FILIP1LQ4L180 1135 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 C4orf46Q504U0 113 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 NBPF12Q5TAG4 269 aaPredicted RBP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 JAKMIP3Q5VZ66 844 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 TMEM179Q6ZVK1 233 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 PHF6Q8IWS0 365 aaKnown RBP eCLIP4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 FBXO22Q8NEZ5 403 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 TTLL11Q8NHH1 800 aa4.41□□□□□ -1.7
ANKRD28-213ENST00000498524 C8orf76Q96K31 380 aa4.41□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms