RNA–Protein interactions for RNA: ENST00000498495.1

HSPG2-213, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 2

Gene HSPG2, Length 488 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-213ENST00000498495 ZNF654Q8IZM8 581 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 CTCFLQ8NI51 663 aaPredicted RBP14.9□□□□□ -0.02
HSPG2-213ENST00000498495 PAWRQ96IZ0 340 aaKnown RBP14.9□□□□□ -0.02
HSPG2-213ENST00000498495 LRRC2Q9BYS8 371 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 CYP39A1Q9NYL5 469 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 SYNGAP1Q96PV0 1343 aa14.9□□□□□ -0.02
HSPG2-213ENST00000498495 SOWAHBA6NEL2 793 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 ASB14A6NK59 587 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 NFIBO00712 420 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 SNAI1O95863 264 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-213ENST00000498495 HMGB1P09429 215 aaKnown RBP14.89□□□□□ -0.03
HSPG2-213ENST00000498495 KIF5BP33176 963 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 EXOSC10Q01780 885 aaKnown RBP14.89□□□□□ -0.03
HSPG2-213ENST00000498495 COL9A3Q14050 684 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-213ENST00000498495 QRICH1Q2TAL8 776 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 ADCK5Q3MIX3 580 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 ANO1Q5XXA6 986 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 SYNE3Q6ZMZ3 975 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 RNF207Q6ZRF8 634 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 UBE2Q1Q7Z7E8 422 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 CLEC4DQ8WXI8 215 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 DPF3Q92784 378 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 MAP3K14Q99558 947 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 HTATIP2Q9BUP3 242 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 AMNQ9BXJ7 453 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 ABHD16BQ9H3Z7 469 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 CDKN2AIPQ9NXV6 580 aaPredicted RBP14.89□□□□□ -0.03
HSPG2-213ENST00000498495 SLC12A7Q9Y666 1083 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 ABCB11O95342 1321 aa14.89□□□□□ -0.03
HSPG2-213ENST00000498495 ZBTB5O15062 677 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 EPB41L2O43491 1005 aaKnown RBP14.88□□□□□ -0.03
HSPG2-213ENST00000498495 DDAH1O94760 285 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 ZNF865P0CJ78 1059 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-213ENST00000498495 CALM1P0DP23 149 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 CALM2P0DP24 149 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 CALM3P0DP25 149 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 CALML3P27482 149 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 ACVR2BQ13705 512 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 ARMCX2Q7L311 632 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 CCDC144CPQ8IYA2 1237 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 ARRDC4Q8NCT1 418 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 KCNB2Q92953 911 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 FGD4Q96M96 766 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 MYL10Q9BUA6 226 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 RIOX1Q9H6W3 641 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 ADD3Q9UEY8 706 aaKnown RBP14.88□□□□□ -0.03
HSPG2-213ENST00000498495 ZHX1Q9UKY1 873 aaPredicted RBP14.88□□□□□ -0.03
HSPG2-213ENST00000498495 FAM184BQ9ULE4 1060 aa14.88□□□□□ -0.03
HSPG2-213ENST00000498495 MRPL11Q9Y3B7 192 aaKnown RBP14.88□□□□□ -0.03
HSPG2-213ENST00000498495 PLXNA1Q9UIW2 1896 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 RARBP10826 455 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 AKR1A1P14550 325 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 GNAQP50148 359 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 RPS6P62753 249 aaKnown RBP14.87□□□□□ -0.03
HSPG2-213ENST00000498495 FGD1P98174 961 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 TRAF1Q13077 416 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 HOMER1Q86YM7 354 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 MCF2L2Q86YR7 1114 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 RGS22Q8NE09 1264 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 DIS3LQ8TF46 1054 aaKnown RBP14.87□□□□□ -0.03
HSPG2-213ENST00000498495 MTMR8Q96EF0 704 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 TCEANC2Q96MN5 208 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 JAKMIP1Q96N16 626 aaKnown RBP14.87□□□□□ -0.03
HSPG2-213ENST00000498495 PURBQ96QR8 312 aaKnown RBP14.87□□□□□ -0.03
HSPG2-213ENST00000498495 PIGSQ96S52 555 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 LZTS2Q9BRK4 669 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 MAF1Q9H063 256 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 C11orf49Q9H6J7 331 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 SNX14Q9Y5W7 946 aa14.87□□□□□ -0.03
HSPG2-213ENST00000498495 MYCNP04198 464 aaPredicted RBP14.86□□□□□ -0.03
HSPG2-213ENST00000498495 RXRAP19793 462 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 PSMA5P28066 241 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 SMARCA1P28370 1054 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 MNX1P50219 401 aaPredicted RBP14.86□□□□□ -0.03
HSPG2-213ENST00000498495 BLOC1S2Q6QNY1 142 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 SGMS1Q86VZ5 419 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 MPHOSPH6Q99547 160 aaKnown RBP14.86□□□□□ -0.03
HSPG2-213ENST00000498495 USP26Q9BXU7 913 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 PCDHA1Q9Y5I3 950 aa14.86□□□□□ -0.03
HSPG2-213ENST00000498495 SMCHD1A6NHR9 2005 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 PNMA6FA0A0J9YX94 578 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 B4DLN1 442 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 CYTH3O43739 400 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 MRPL12P52815 198 aaKnown RBP14.85□□□□□ -0.03
HSPG2-213ENST00000498495 GJC2Q5T442 439 aaPredicted RBP14.85□□□□□ -0.03
HSPG2-213ENST00000498495 SLC30A10Q6XR72 485 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 RAB11FIP4Q86YS3 637 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 FANCBQ8NB91 859 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 PIBF1Q8WXW3 757 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 TBC1D5Q92609 795 aa14.85□□□□□ -0.03
HSPG2-213ENST00000498495 LOC102724159A0A0B4J2E5 919 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 DNM1LO00429 736 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 CPA1P15085 419 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 ALDH5A1P51649 535 aaPredicted RBP14.84□□□□□ -0.03
HSPG2-213ENST00000498495 PWP2Q15269 919 aaKnown RBP14.84□□□□□ -0.03
HSPG2-213ENST00000498495 SLC35G1Q2M3R5 365 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 CCDC144BQ3MJ40 725 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 EEPD1Q7L9B9 569 aa14.84□□□□□ -0.03
HSPG2-213ENST00000498495 DNERQ8NFT8 737 aa14.84□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms