RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 MTMR4Q9NYA4 1195 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 GNEQ9Y223 722 aaKnown RBP16.62■□□□□ 0.25
CCDC58-207ENST00000498466 COG6Q9Y2V7 657 aa16.62■□□□□ 0.25
CCDC58-207ENST00000498466 SOWAHBA6NEL2 793 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 TMEM232C9JQI7 657 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 B4GALT4O60513 344 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 FDX1P10109 184 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 MYOGP15173 224 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 PLA2G5P39877 138 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 TDO2P48775 406 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 IKQ13123 557 aaPredicted RBP16.61■□□□□ 0.25
CCDC58-207ENST00000498466 SKIV2LQ15477 1246 aaKnown RBP16.61■□□□□ 0.25
CCDC58-207ENST00000498466 FAM122AQ96E09 287 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 NECAB3Q96P71 396 aaPredicted RBP16.61■□□□□ 0.25
CCDC58-207ENST00000498466 SEZ6LQ9BYH1 1024 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 WNT8AQ9H1J5 351 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 A1CFQ9NQ94 594 aaKnown RBP16.61■□□□□ 0.25
CCDC58-207ENST00000498466 RNF146Q9NTX7 359 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 ZBTB40Q9NUA8 1239 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 DDX19BQ9UMR2 479 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 SYNPO2Q9UMS6 1093 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 GRIN2DO15399 1336 aa16.61■□□□□ 0.25
CCDC58-207ENST00000498466 APPP05067 770 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 SMPD1P17405 629 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 PTGS1P23219 599 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 STAT2P52630 851 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 PSMC6P62333 389 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 OSBP2Q969R2 916 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 CHMP4CQ96CF2 233 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 SCLYQ96I15 445 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 AGBL1Q96MI9 1066 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 LRRCC1Q9C099 1032 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 PCDHA11Q9Y5I1 949 aa16.6■□□□□ 0.25
CCDC58-207ENST00000498466 MCM3APO60318 1980 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 TSPY3P0CV98 308 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 TSPY8P0CW00 308 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 ALAS1P13196 640 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 ATP2A2P16615 1042 aaKnown RBP16.59■□□□□ 0.25
CCDC58-207ENST00000498466 TFF2Q03403 129 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 AAK1Q2M2I8 961 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 EEPD1Q7L9B9 569 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 CHURC1Q8WUH1 139 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 APPBP2Q92624 585 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 TRERF1Q96PN7 1200 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 EPB41L4AQ9HCS5 686 aaPredicted RBP16.59■□□□□ 0.25
CCDC58-207ENST00000498466 PDGFCQ9NRA1 345 aa16.59■□□□□ 0.25
CCDC58-207ENST00000498466 DDX49Q9Y6V7 483 aaKnown RBP16.59■□□□□ 0.25
CCDC58-207ENST00000498466 MYH7P12883 1935 aa16.58■□□□□ 0.25
CCDC58-207ENST00000498466 GPAA1O43292 621 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 SMARCA5O60264 1052 aaPredicted RBP16.58■□□□□ 0.24
CCDC58-207ENST00000498466 BMP1P13497 986 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 GNAT2P19087 354 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 TKFCQ3LXA3 575 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 IQSEC1Q6DN90 963 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 FAM160B2Q86V87 743 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 FBXO16Q8IX29 292 aaPredicted RBP16.58■□□□□ 0.24
CCDC58-207ENST00000498466 KBTBD3Q8NAB2 608 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 C1QTNF1Q9BXJ1 281 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 ECHDC1Q9NTX5 307 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 ZNF536O15090 1300 aa16.58■□□□□ 0.24
CCDC58-207ENST00000498466 SLC1A4P43007 532 aa16.57■□□□□ 0.24
CCDC58-207ENST00000498466 TAPT1Q6NXT6 567 aa16.57■□□□□ 0.24
CCDC58-207ENST00000498466 NEDD1Q8NHV4 660 aa16.57■□□□□ 0.24
CCDC58-207ENST00000498466 STAG1Q8WVM7 1258 aa16.57■□□□□ 0.24
CCDC58-207ENST00000498466 ALDH8A1Q9H2A2 487 aaPredicted RBP16.57■□□□□ 0.24
CCDC58-207ENST00000498466 Q9Y3F1 56 aa16.57■□□□□ 0.24
CCDC58-207ENST00000498466 MYH4Q9Y623 1939 aa16.57■□□□□ 0.24
CCDC58-207ENST00000498466 BDP1A6H8Y1 2624 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 PLIN4Q96Q06 1357 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 RNF113AO15541 343 aaKnown RBP16.56■□□□□ 0.24
CCDC58-207ENST00000498466 GTPBP6O43824 516 aaPredicted RBP16.56■□□□□ 0.24
CCDC58-207ENST00000498466 PFKMP08237 780 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 SUPT20HL2P0C7V6 817 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 MCCP23508 829 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 KCNQ1P51787 676 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 SNAP25P60880 206 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 TFAP4Q01664 338 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 PDE4BQ07343 736 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 TTLL4Q14679 1199 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 TMEM67Q5HYA8 995 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 TMEM63BQ5T3F8 832 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 KIAA1211Q6ZU35 1233 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 DEFB128Q7Z7B8 93 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 GMCL1Q96IK5 515 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 CHMP4BQ9H444 224 aaKnown RBP16.56■□□□□ 0.24
CCDC58-207ENST00000498466 CERS4Q9HA82 394 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 CYP39A1Q9NYL5 469 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 GBF1Q92538 1859 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 TRANK1O15050 2925 aa16.56■□□□□ 0.24
CCDC58-207ENST00000498466 PATL2C9JE40 543 aaKnown RBP16.55■□□□□ 0.24
CCDC58-207ENST00000498466 M0R2C6 588 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 RFXAPO00287 272 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 ERC2O15083 957 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 CA3P07451 260 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 ZFYP08048 801 aaPredicted RBP16.55■□□□□ 0.24
CCDC58-207ENST00000498466 CYP2C9P11712 490 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 MUM1L1Q5H9M0 696 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 NSMFQ6X4W1 530 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 KCTD1Q719H9 257 aa16.55■□□□□ 0.24
CCDC58-207ENST00000498466 IFNL3Q8IZI9 196 aa16.55■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms