RNA–Protein interactions for RNA: ENST00000498219.5

HPS1-214, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

TSL 5

Gene HPS1, Length 845 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-214ENST00000498219 JMJD4Q9H9V9 463 aa17.16■□□□□ 0.34
HPS1-214ENST00000498219 DIS3Q9Y2L1 958 aaKnown RBP17.16■□□□□ 0.34
HPS1-214ENST00000498219 ALPK3Q96L96 1907 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 PALM3A6NDB9 673 aaPredicted RBP17.15■□□□□ 0.34
HPS1-214ENST00000498219 SOWAHBA6NEL2 793 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 EPB41L2O43491 1005 aaKnown RBP17.15■□□□□ 0.34
HPS1-214ENST00000498219 TROAPQ12815 778 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 KRT32Q14532 448 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 QRICH1Q2TAL8 776 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 NFXL1Q6ZNB6 911 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 UBE2Q1Q7Z7E8 422 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 CATIPQ7Z7H3 387 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 FAM133AQ8N9E0 248 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 CLEC4DQ8WXI8 215 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 CYP39A1Q9NYL5 469 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 DDX20Q9UHI6 824 aaKnown RBP17.15■□□□□ 0.34
HPS1-214ENST00000498219 OGDHLQ9ULD0 1010 aa17.15■□□□□ 0.34
HPS1-214ENST00000498219 SNAI1O95863 264 aaPredicted RBP17.14■□□□□ 0.33
HPS1-214ENST00000498219 RXRAP19793 462 aa17.14■□□□□ 0.33
HPS1-214ENST00000498219 MNX1P50219 401 aaPredicted RBP17.14■□□□□ 0.33
HPS1-214ENST00000498219 EXOSC10Q01780 885 aaKnown RBP17.14■□□□□ 0.33
HPS1-214ENST00000498219 BAATQ14032 418 aaPredicted RBP17.14■□□□□ 0.33
HPS1-214ENST00000498219 SLC30A10Q6XR72 485 aa17.14■□□□□ 0.33
HPS1-214ENST00000498219 ZNF654Q8IZM8 581 aa17.14■□□□□ 0.33
HPS1-214ENST00000498219 PAWRQ96IZ0 340 aaKnown RBP17.14■□□□□ 0.33
HPS1-214ENST00000498219 ASTN1O14525 1302 aa17.14■□□□□ 0.33
HPS1-214ENST00000498219 PTPDC1A2A3K4 754 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 ZNF865P0CJ78 1059 aaPredicted RBP17.13■□□□□ 0.33
HPS1-214ENST00000498219 DHX32Q7L7V1 743 aaKnown RBP17.13■□□□□ 0.33
HPS1-214ENST00000498219 HOMER1Q86YM7 354 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 CCDC144CPQ8IYA2 1237 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 PIBF1Q8WXW3 757 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 LENG1Q96BZ8 264 aaPredicted RBP17.13■□□□□ 0.33
HPS1-214ENST00000498219 TMEM87BQ96K49 555 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.13■□□□□ 0.33
HPS1-214ENST00000498219 ZHX1Q9UKY1 873 aaPredicted RBP17.13■□□□□ 0.33
HPS1-214ENST00000498219 MKI67P46013 3256 aaKnown RBP17.13■□□□□ 0.33
HPS1-214ENST00000498219 PFASO15067 1338 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 WDR19Q8NEZ3 1342 aa17.13■□□□□ 0.33
HPS1-214ENST00000498219 CCDC69A6NI79 296 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 SEPT4O43236 478 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 PPP1R11O60927 126 aaPredicted RBP17.12■□□□□ 0.33
HPS1-214ENST00000498219 MYCNP04198 464 aaPredicted RBP17.12■□□□□ 0.33
HPS1-214ENST00000498219 CASTP20810 708 aaKnown RBP17.12■□□□□ 0.33
HPS1-214ENST00000498219 CALML3P27482 149 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 ARMCX2Q7L311 632 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 TBC1D5Q92609 795 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 PIGSQ96S52 555 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 CNPY2Q9Y2B0 182 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 SYNGAP1Q96PV0 1343 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 CEP290O15078 2479 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 LRRC37A2A6NM11 1700 aa17.12■□□□□ 0.33
HPS1-214ENST00000498219 CYTH3O43739 400 aa17.11■□□□□ 0.33
HPS1-214ENST00000498219 BLOC1S2Q6QNY1 142 aa17.11■□□□□ 0.33
HPS1-214ENST00000498219 MAMDC4Q6UXC1 1216 aa17.11■□□□□ 0.33
HPS1-214ENST00000498219 ZNF467Q7Z7K2 595 aaPredicted RBP17.11■□□□□ 0.33
HPS1-214ENST00000498219 FBXO11Q86XK2 927 aa17.11■□□□□ 0.33
HPS1-214ENST00000498219 CMTR1Q8N1G2 835 aaKnown RBP17.11■□□□□ 0.33
HPS1-214ENST00000498219 MTA3Q9BTC8 594 aa17.11■□□□□ 0.33
HPS1-214ENST00000498219 DDAH1O94760 285 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 PLEKHA8P1O95397 391 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 RPS6KB1P23443 525 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 LIFRP42702 1097 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 ACVR2BQ13705 512 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 GJC2Q5T442 439 aaPredicted RBP17.1■□□□□ 0.33
HPS1-214ENST00000498219 RNF207Q6ZRF8 634 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 Q6ZUG5 572 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 NECAB2Q7Z6G3 386 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 MSL3Q8N5Y2 521 aaKnown RBP17.1■□□□□ 0.33
HPS1-214ENST00000498219 ANKLE1Q8NAG6 615 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 CTCFLQ8NI51 663 aaPredicted RBP17.1■□□□□ 0.33
HPS1-214ENST00000498219 DPF3Q92784 378 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 MTMR8Q96EF0 704 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 UPF3BQ9BZI7 483 aaKnown RBP17.1■□□□□ 0.33
HPS1-214ENST00000498219 RIOX1Q9H6W3 641 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 ABCB11O95342 1321 aa17.1■□□□□ 0.33
HPS1-214ENST00000498219 MSCO60682 206 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 HMGB1P09429 215 aaKnown RBP17.09■□□□□ 0.33
HPS1-214ENST00000498219 PSMA5P28066 241 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 RPS6P62753 249 aaKnown RBP17.09■□□□□ 0.33
HPS1-214ENST00000498219 EEPD1Q7L9B9 569 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 MICU3Q86XE3 530 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 TMTC2Q8N394 836 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 KATNBL1Q9H079 304 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 C11orf49Q9H6J7 331 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 ZSWIM6Q9HCJ5 1215 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 NRBP1Q9UHY1 535 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 PNMA2Q9UL42 364 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 BRPF3Q9ULD4 1205 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 SLC12A7Q9Y666 1083 aa17.09■□□□□ 0.33
HPS1-214ENST00000498219 ZBTB5O15062 677 aa17.08■□□□□ 0.32
HPS1-214ENST00000498219 ADCY6O43306 1168 aa17.08■□□□□ 0.32
HPS1-214ENST00000498219 EIF5BO60841 1220 aaKnown RBP17.08■□□□□ 0.32
HPS1-214ENST00000498219 PTGS1P23219 599 aa17.08■□□□□ 0.32
HPS1-214ENST00000498219 ALDH5A1P51649 535 aaPredicted RBP17.08■□□□□ 0.32
HPS1-214ENST00000498219 IRX5P78411 483 aaPredicted RBP17.08■□□□□ 0.32
HPS1-214ENST00000498219 RUFY3Q7L099 469 aa17.08■□□□□ 0.32
HPS1-214ENST00000498219 FBXO16Q8IX29 292 aaPredicted RBP17.08■□□□□ 0.32
HPS1-214ENST00000498219 SRBD1Q8N5C6 995 aaKnown RBP17.08■□□□□ 0.32
HPS1-214ENST00000498219 AMNQ9BXJ7 453 aa17.08■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms