RNA–Protein interactions for RNA: ENST00000498020.1

HLA-DMB-262, Transcript of major histocompatibility complex, class II, DM beta, humanhuman

Gene HLA-DMB, Length 4,569 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMB-262ENST00000498020 TRIM21P19474 475 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CASQ1P31415 396 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CETN2P41208 172 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CDK8P49336 464 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 PPP4CP60510 307 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SPATA1Q5VX52 437 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SPECC1LQ69YQ0 1117 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 OSBPL5Q9H0X9 879 aaPredicted RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SEPT11Q9NVA2 429 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 PNMA3Q9UL41 463 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 LAD1O00515 517 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 AP5Z1O43299 807 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 EIF3JO75822 258 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SLU7O95391 586 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CFBP00751 764 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 POTEJP0CG39 1038 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 UBXN2AP68543 259 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 ASIC1P78348 528 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 GPSM2P81274 684 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 TRAF1Q13077 416 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 PAK1Q13153 545 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 FKBP15Q5T1M5 1219 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 MAP3K14Q99558 947 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 AKR1B15C9JRZ8 316 aaPredicted RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 NCBP1Q09161 790 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SPP2Q13103 211 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 GRM4Q14833 912 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 INF2Q27J81 1249 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 REXO1Q8N1G1 1221 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZNF710Q8N1W2 664 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SRBD1Q8N5C6 995 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CRAMP1Q96RY5 1269 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 GLT8D2Q9H1C3 349 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 KCNF1Q9H3M0 494 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 DNAI1Q9UI46 699 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCDC144BQ3MJ40 725 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 KRT79Q5XKE5 535 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 METTL16Q86W50 562 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 CNGA4Q8IV77 575 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 TAF4BQ92750 862 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 STAMQ92783 540 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 NAP1L4Q99733 375 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 TSG101Q99816 390 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 SRRTQ9BXP5 876 aaKnown RBP8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 AP5M1Q9H0R1 490 aa8.95□□□□□ -0.98
HLA-DMB-262ENST00000498020 BICDL2A1A5D9 508 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 FAM196BA6NMK8 535 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCNT1O60563 726 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 KIF20AO95235 890 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 IDEP14735 1019 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 GNG11P61952 73 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZNF397Q8NF99 534 aaPredicted RBP8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 EPSTI1Q96J88 318 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 UIMC1Q96RL1 719 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 CTNND2Q9UQB3 1225 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 DDX52Q9Y2R4 599 aaKnown RBP eCLIP8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCDC175P0C221 793 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 GOLGA8HP0CJ92 632 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 MTIF2P46199 727 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 JAKMIP3Q5VZ66 844 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 APOBEC3FQ8IUX4 373 aaKnown RBP8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 IGSF22Q8N9C0 903 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 GLG1Q92896 1179 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 TMEM47Q9BQJ4 181 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 SWAP70Q9UH65 585 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 CRYBG1Q9Y4K1 1723 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 LRP6O75581 1613 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 hCG_1984214I3L0E3 225 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 ATP1A3P13637 1013 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 ADCY7P51828 1080 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 RASA3Q14644 834 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 NEK8Q86SG6 692 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZNF713Q8N859 430 aaPredicted RBP8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 DNAI2Q9GZS0 605 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 ZFYVE28Q9HCC9 887 aa8.94□□□□□ -0.98
HLA-DMB-262ENST00000498020 EZRP15311 586 aaKnown RBP8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CYP2B6P20813 491 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 ASPRV1Q53RT3 343 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SYT10Q6XYQ8 523 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CABP7Q86V35 215 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 TXNRD3Q86VQ6 643 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 GRAMD1CQ8IYS0 662 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 NEDD1Q8NHV4 660 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 PAGE5Q96GU1 130 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCDC17Q96LX7 622 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 BLZF1Q9H2G9 400 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 M0QZ92 97 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 PSMD14O00487 310 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 OR52Z1P0C646 297 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 ATP2C1P98194 919 aaPredicted RBP8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 TRIM14Q14142 442 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 KIAA1328Q86T90 577 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SP8Q8IXZ3 490 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 KCNH4Q9UQ05 1017 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 SUGT1Q9Y2Z0 365 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CNTNAP5Q8WYK1 1306 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCL15-CCL14A0A0B4J2E2 113 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 GOLGA6L7A0A1B0GV03 622 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 ICA1Q05084 483 aa8.93□□□□□ -0.98
HLA-DMB-262ENST00000498020 CCL15Q16663 113 aa8.93□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms